RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 LHPPQ9H008 270 aa11.92□□□□□ -0.5
RAD50-209ENST00000533482 PCDHGA8Q9Y5G5 932 aa11.92□□□□□ -0.5
RAD50-209ENST00000533482 PEX16Q9Y5Y5 336 aa11.92□□□□□ -0.5
RAD50-209ENST00000533482 TCRBV21S2A2A0A5A6 115 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 LSM1O15116 133 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 MPZL2O60487 215 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 RNGTTO60942 597 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 SBK3P0C264 359 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 TFPIP10646 304 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 GRIA2P42262 883 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 RAB25P57735 213 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 AP3S1Q92572 193 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 GPR174Q9BXC1 333 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 A0A1B0GTW7 788 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 BTN3A3O00478 584 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 CFIP05156 583 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 KHKP50053 298 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 EIF4HQ15056 248 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 AAK1Q2M2I8 961 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 TPRG1LQ5T0D9 272 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 SLC35F1Q5T1Q4 408 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 SLC22A16Q86VW1 577 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 GRHL3Q8TE85 626 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 FCGR1BQ92637 280 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 TRMT2BQ96GJ1 504 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 BIRC8Q96P09 236 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 IFT27Q9BW83 186 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 SLC2A11Q9BYW1 496 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 TMEM9Q9P0T7 183 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 RPL36Q9Y3U8 105 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 ASB1Q9Y576 335 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 FAM47E-STBD1D6RA91 191 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 H0YJX3 145 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 ACOX3O15254 700 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 MPC1LP0DKB6 136 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 ZNF26P17031 533 aaPredicted RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 HK3P52790 923 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 RTL4Q6ZR62 310 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 NRSN1Q8IZ57 195 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 OR2A12Q8NGT7 310 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 NEIL2Q969S2 332 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 NAA50Q9GZZ1 169 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 RETREG1Q9H6L5 497 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 ANKHQ9HCJ1 492 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
RAD50-209ENST00000533482 IKZF2Q9UKS7 526 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 IRAK3Q9Y616 596 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 PIAS3Q9Y6X2 628 aa11.91□□□□□ -0.5
RAD50-209ENST00000533482 A0A1B0GTL3 188 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 FABP12A6NFH5 140 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 CYP17A1P05093 508 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 RAB14P61106 215 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 OR8K5Q8NH50 307 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 KLHL6Q8WZ60 621 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 SLC22A18Q96BI1 424 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 COQ7Q99807 217 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 MCUBQ9NWR8 336 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 TIMP2P16035 220 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 BLKP51451 505 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 RPS21P63220 83 aaKnown RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 TXNL4AP83876 142 aaKnown RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 NFATC3Q12968 1075 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 USP43Q70EL4 1123 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 CARM1Q86X55 608 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 SLC5A8Q8N695 610 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 LMX1AQ8TE12 382 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 MRPS17Q9Y2R5 130 aaKnown RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 SPTBN2O15020 2390 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 FAM170BA6NMN3 283 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 CAPN5O15484 640 aaPredicted RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 LCKP06239 509 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 DHPSP49366 369 aaPredicted RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 SLC7A9P82251 487 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 NDUFA9Q16795 377 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 HNRNPA1L2Q32P51 320 aaKnown RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 SLC36A3Q495N2 470 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 HSDL2Q6YN16 418 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 FAM92BQ6ZTR7 304 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 ZNF420Q8TAQ5 688 aaPredicted RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 CIDECQ96AQ7 238 aaPredicted RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 LGALS12Q96DT0 336 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 DPYSL5Q9BPU6 564 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 OSBPL10Q9BXB5 764 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 RAB11FIP5Q9BXF6 653 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 ZNF222Q9UK12 451 aa11.9□□□□□ -0.5
RAD50-209ENST00000533482 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
RAD50-209ENST00000533482 BOLA2-SMG1P6H3BVE0 249 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 MATN1P21941 496 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 SLC5A2P31639 672 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 ZNF404Q494X3 552 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 SHQ1Q6PI26 577 aaKnown RBP11.9□□□□□ -0.51
RAD50-209ENST00000533482 CXXC5Q7LFL8 322 aaKnown RBP11.9□□□□□ -0.51
RAD50-209ENST00000533482 RDH12Q96NR8 316 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 GAL3ST1Q99999 423 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 SLC17A9Q9BYT1 436 aa11.9□□□□□ -0.51
RAD50-209ENST00000533482 CA5BQ9Y2D0 317 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms