RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 IFT80Q9P2H3 777 aaPredicted RBP8.9□□□□□ -0.98
VPS26B-207ENST00000532160 STOML1Q9UBI4 398 aa8.9□□□□□ -0.98
VPS26B-207ENST00000532160 NDOR1Q9UHB4 597 aa8.9□□□□□ -0.98
VPS26B-207ENST00000532160 GPN3Q9UHW5 284 aaPredicted RBP8.9□□□□□ -0.98
VPS26B-207ENST00000532160 RNF11Q9Y3C5 154 aa8.9□□□□□ -0.98
VPS26B-207ENST00000532160 PCDHGA10Q9Y5H3 936 aa8.9□□□□□ -0.98
VPS26B-207ENST00000532160 CSAG2Q9Y5P2 127 aa8.9□□□□□ -0.98
VPS26B-207ENST00000532160 AP1M2Q9Y6Q5 423 aa8.9□□□□□ -0.98
VPS26B-207ENST00000532160 ANKUB1A6NFN9 424 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 PEX12O00623 359 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 UBFD1O14562 309 aaKnown RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 FFAR3O14843 346 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 GPR42O15529 346 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ITM2AO43736 263 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 OR1F1O43749 312 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 SH3BGRLO75368 114 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 LYPLA1O75608 230 aaPredicted RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 OR4F21O95013 312 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ALPPP05187 535 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 SERPIND1P05546 499 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 CHRNGP07510 517 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ARRB2P32121 409 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 VSX2P58304 361 aaPredicted RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 DNAJB13P59910 316 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 SNRPNP63162 240 aaKnown RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 REEP5Q00765 189 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ASPHQ12797 758 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 TRAF3Q13114 568 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 CPSF6Q16630 551 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 SPRED3Q2MJR0 410 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 TCHHL1Q5QJ38 904 aaPredicted RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ATG9BQ674R7 924 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 Q6ZS92 163 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 MCATQ8IVS2 390 aaKnown RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ABHD11Q8NFV4 315 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 OR4F6Q8NGB9 312 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 OR4K1Q8NGD4 311 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 PPP1R14CQ8TAE6 165 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 PROKR1Q8TCW9 393 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 MTFMTQ96DP5 389 aaKnown RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 CCDC126Q96EE4 140 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 C5orf34Q96MH7 638 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 KCNA7Q96RP8 456 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 BARD1Q99728 777 aaKnown RBP8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ZFYVE21Q9BQ24 234 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 C17orf62Q9BQA9 187 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 CHRNA10Q9GZZ6 450 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 C1orf21Q9H246 121 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 PELI2Q9HAT8 420 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 RNPEPL1Q9HAU8 725 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 PRM3Q9NNZ6 103 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 TNFRSF12AQ9NP84 129 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 MID1IP1Q9NPA3 183 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 IRAK4Q9NWZ3 460 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 MCM8Q9UJA3 840 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 ZNF225Q9UK10 706 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 SLC5A6Q9Y289 635 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 C15orf41Q9Y2V0 281 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 FIS1Q9Y3D6 152 aa8.89□□□□□ -0.99
VPS26B-207ENST00000532160 GOLGA8QA0A0J9YX86 632 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 GOLGA8OA6NCC3 632 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 GOLGA8NF8WBI6 632 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 H0YGG7 62 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 GYG2O15488 501 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 P2RX6O15547 441 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 FKBP9O95302 570 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 ANP32DO95626 131 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 ESRRAP11474 423 aaPredicted RBP8.88□□□□□ -0.99
VPS26B-207ENST00000532160 PCNAP12004 261 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 GRK3P35626 688 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 GCGRP47871 477 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 FOXA1P55317 472 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 ARF3P61204 181 aaPredicted RBP8.88□□□□□ -0.99
VPS26B-207ENST00000532160 KCNJ2P63252 427 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 STX3Q13277 289 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 DDX39BQ13838 428 aaKnown RBP8.88□□□□□ -0.99
VPS26B-207ENST00000532160 HKDC1Q2TB90 917 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 SGO1Q5FBB7 561 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 METTL21CQ5VZV1 264 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 LETMD1Q6P1Q0 360 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 TLDC1Q6P9B6 456 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 MYO7BQ6PIF6 2116 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 SCIMPQ6UWF3 145 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 FRMD7Q6ZUT3 714 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 RNF44Q7L0R7 432 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 VN1R4Q7Z5H5 301 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS26B-207ENST00000532160 ZADH2Q8N4Q0 377 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 DTWD1Q8N5C7 304 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 CDYL2Q8N8U2 506 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 ANKRD53Q8N9V6 530 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 AGR3Q8TD06 166 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.88□□□□□ -0.99
VPS26B-207ENST00000532160 MCUR1Q96AQ8 359 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 PTCD3Q96EY7 689 aaKnown RBP8.88□□□□□ -0.99
VPS26B-207ENST00000532160 OR2A5Q96R48 311 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 HBEGFQ99075 208 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 AIF1LQ9BQI0 150 aa8.88□□□□□ -0.99
VPS26B-207ENST00000532160 C20orf27Q9GZN8 174 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms