RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	CCT8L2	Q96SF2	557 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	SCN2A	Q99250	2005 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	ZNF559	Q9BR84	538 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	RBCK1	Q9BYM8	510 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	POPDC3	Q9HBV1	291 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	PRDM9	Q9NQV7	894 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	LRFN1	Q9P244	771 aa		11.22	□□□□□ -0.61
CSRP1-213	ENST00000530120	IGKV3D-11	A0A0A0MRZ8	115 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	TCRBV16S1A1N1	A0A5B0	115 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	TMEM200C	A6NKL6	621 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	NPIPA5	E9PKD4	350 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	GUCA1C	O95843	209 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	SERPIND1	P05546	499 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	GNAZ	P19086	355 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	KLK2	P20151	261 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	ARL4C	P56559	192 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	MSS51	Q4VC12	460 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	FCRLB	Q6BAA4	426 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	TTC19	Q6DKK2	380 aa	Predicted RBP	11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	NXPE4	Q6UWF7	544 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	FRA10AC1	Q70Z53	315 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	TMPRSS11B	Q86T26	416 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	SIAH3	Q8IW03	269 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	OR5T3	Q8NGG3	340 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	UTP15	Q8TED0	518 aa	Known RBP	11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	AGAP11	Q8TF27	550 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	GAL3ST3	Q96A11	431 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	PTCHD1	Q96NR3	888 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	NPAS2	Q99743	824 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	NPL	Q9BXD5	320 aa	Predicted RBP	11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	KLHL1	Q9NR64	748 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	PPT2	Q9UMR5	302 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	NPIPA1	Q9UND3	350 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	OARD1	Q9Y530	152 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	TEX264	Q9Y6I9	313 aa		11.21	□□□□□ -0.61
CSRP1-213	ENST00000530120	HCFC1	P51610	2035 aa		11.21	□□□□□ -0.62
CSRP1-213	ENST00000530120	PRRG2	O14669	202 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	IVD	P26440	423 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	TPP2	P29144	1249 aa	Predicted RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	DNAJA1	P31689	397 aa	Known RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	ELK3	P41970	407 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	HLCS	P50747	726 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	IST1	P53990	364 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	MLF1	P58340	268 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	FOLH1	Q04609	750 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	MGAT5	Q09328	741 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	RCN2	Q14257	317 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	CATSPERE	Q5SY80	951 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	CES4A	Q5XG92	561 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	SPINK14	Q6IE38	97 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	GALNTL5	Q7Z4T8	443 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	THOC6	Q86W42	341 aa	Known RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	KLHDC8A	Q8IYD2	350 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	TCAIM	Q8N3R3	496 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	ANKRD53	Q8N9V6	530 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	C7orf57	Q8NEG2	295 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	CFAP36	Q96G28	342 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	FAR2	Q96K12	515 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	TSNARE1	Q96NA8	513 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	FOXC2	Q99958	501 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	TREX2	Q9BQ50	279 aa	Predicted RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	CCDC134	Q9H6E4	229 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	GPRC5B	Q9NZH0	403 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	PPIE	Q9UNP9	301 aa	Known RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	CHMP2B	Q9UQN3	213 aa		11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	MRPS33	Q9Y291	106 aa	Known RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.2	□□□□□ -0.62
CSRP1-213	ENST00000530120	OR2W5	A6NFC9	320 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120		E9PLN8	166 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	KLRC4-KLRK1	H3BQV0	150 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	ASNA1	O43681	348 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	B4GALT2	O60909	372 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	BANF1	O75531	89 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	ZWINT	O95229	277 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	SHBG	P04278	402 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	SMIM10L1	P0DMW3	83 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	TFEB	P19484	476 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	CLCN2	P51788	898 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	HSD17B7	P56937	341 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	CBLB	Q13191	982 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	SLC29A2	Q14542	456 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	TNFAIP8L3	Q5GJ75	292 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	CDKL4	Q5MAI5	379 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	TRMT10B	Q6PF06	316 aa	Known RBP	11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	C3P1	Q6ZMU1	363 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	ZC3HC1	Q86WB0	502 aa	Known RBP	11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	RELL1	Q8IUW5	271 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	IGDCC3	Q8IVU1	814 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	GPALPP1	Q8IXQ4	340 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	KRT78	Q8N1N4	520 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	ACBD4	Q8NC06	268 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	B3GNT7	Q8NFL0	401 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	SMIM10	Q96HG1	83 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	EGFL8	Q99944	293 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	VKORC1	Q9BQB6	163 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	DEFB126	Q9BYW3	111 aa		11.19	□□□□□ -0.62
CSRP1-213	ENST00000530120	NSRP1	Q9H0G5	558 aa	Known RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms