RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ROGDIQ9GZN7 287 aa23.38■■□□□ 1.33
LDLRAD3-203ENST00000528989 CLMPQ9H6B4 373 aa23.38■■□□□ 1.33
LDLRAD3-203ENST00000528989 FBXO8Q9NRD0 319 aa23.38■■□□□ 1.33
LDLRAD3-203ENST00000528989 A0A088AWK7 358 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 FAM227AF5H4B4 570 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 EBAG9O00559 213 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 PROM1O43490 865 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 NSA2O95478 260 aaKnown RBP23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 PRPS1L1P21108 318 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 ZNF10P21506 573 aaPredicted RBP23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 POLR2JP52435 117 aaKnown RBP23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 UGT8Q16880 541 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 VPS26BQ4G0F5 336 aa23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 LIN37Q96GY3 246 aaPredicted RBP23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 AKAP7Q9P0M2 348 aaPredicted RBP23.37■■□□□ 1.33
LDLRAD3-203ENST00000528989 PGRMC2O15173 223 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 PIM1P11309 404 aaPredicted RBP23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ZNF28P17035 718 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ITGAXP20702 1163 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ASMTP46597 345 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ALDH9A1P49189 494 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 MAPK10P53779 464 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 FAM174BQ3ZCQ3 159 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 SPANXN4Q5MJ08 99 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 BLOC1S3Q6QNY0 202 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 SNX32Q86XE0 403 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 CA13Q8N1Q1 262 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 SLC7A5P2Q9GIP4 190 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ACTR5Q9H9F9 607 aaPredicted RBP23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 SLC52A3Q9NQ40 469 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 B3GALT1Q9Y5Z6 326 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 DCDC2BA2VCK2 349 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 TMX2-CTNND1H3BSU7 103 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 NR5A2O00482 541 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 CHST10O43529 356 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 T-ENOLP0DO92 83 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ADSLP30566 484 aaPredicted RBP23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 ARSFP54793 590 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 PHC1P78364 1004 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 KLC1Q07866 573 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 PGS1Q32NB8 556 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 DLL3Q9NYJ7 618 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 PISDQ9UG56 409 aa23.36■■□□□ 1.33
LDLRAD3-203ENST00000528989 B4E171 279 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 SCAMP2O15127 329 aaKnown RBP23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 AIFM1O95831 613 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 FURINP09958 794 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 LAMP1P11279 417 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 CAPN3P20807 821 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 TSPAN7P41732 249 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 AVPR1BP47901 424 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 CPA2P48052 419 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 TRA2BP62995 288 aaKnown RBP23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 ZNF385BQ569K4 471 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 FAM91A1Q658Y4 838 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 RHBDD2Q6NTF9 364 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 FAM47BQ8NA70 645 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 CLIP3Q96DZ5 547 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 RBCK1Q9BYM8 510 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 REEP4Q9H6H4 257 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 SH3BP4Q9P0V3 963 aa23.35■■□□□ 1.33
LDLRAD3-203ENST00000528989 A0A1B0GX78 115 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 FAM234BA2RU67 622 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 DSCR3O14972 297 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 SLC22A2O15244 555 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 COX4I1P13073 169 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 COX7A2P14406 83 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 HNRNPFP52597 415 aaKnown RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 SHC2P98077 582 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 RCAN2Q14206 197 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 ERV3-1Q14264 604 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 SPRED3Q2MJR0 410 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 C3orf38Q5JPI3 329 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 TICAM1Q8IUC6 712 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 TMEM52Q8NDY8 209 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 AKIRIN1Q9H9L7 192 aaPredicted RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 TXLNGQ9NUQ3 528 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 SATB2Q9UPW6 733 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 CYR61O00622 381 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 PLD2O14939 933 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 SNRPB2P08579 225 aaKnown RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 JMJD7P0C870 316 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 DDCP20711 480 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 EFNA1P20827 205 aaPredicted RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 CPN2P22792 545 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 IRX1P78414 480 aaPredicted RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 CYLC2Q14093 348 aaPredicted RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 HEPACAMQ14CZ8 416 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 TIGD2Q4W5G0 525 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 BPHLQ86WA6 291 aaPredicted RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 FAM9CQ8IZT9 166 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 PEX11GQ96HA9 241 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 ZBTB18Q99592 522 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 LYRM4Q9HD34 91 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 LYARQ9NX58 379 aaKnown RBP23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 PCDHB3Q9Y5E6 796 aa23.34■■□□□ 1.33
LDLRAD3-203ENST00000528989 ASPMQ8IZT6 3477 aa23.33■■□□□ 1.33
LDLRAD3-203ENST00000528989 OR2W5A6NFC9 320 aa23.33■■□□□ 1.33
LDLRAD3-203ENST00000528989 H0YIG0 161 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms