RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SARNPP82979 210 aaKnown RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 TIAL1Q01085 375 aaKnown RBP eCLIP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 SP140Q13342 867 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 DHX34Q14147 1143 aaKnown RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 CSHL1Q14406 222 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 UGT3A1Q6NUS8 523 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 HSDL2Q6YN16 418 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 SEM1Q6ZVN7 128 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 KRTAP1-3Q8IUG1 177 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 LMNTD2Q8IXW0 634 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 GPATCH11Q8N954 259 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 RELL2Q8NC24 303 aaPredicted RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 SCYL1Q96KG9 808 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 HIST1H2AHQ96KK5 128 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 OR4K3Q96R72 315 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 HIST1H2AJQ99878 128 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 H2AFJQ9BTM1 129 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 NPLQ9BXD5 320 aaPredicted RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 SACM1LQ9NTJ5 587 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 BEX4Q9NWD9 120 aaPredicted RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 ZNF629Q9UEG4 869 aaPredicted RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 MTRF1LQ9UGC7 380 aaKnown RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 ZANQ9Y493 2812 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 G3V3Y1 287 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 TGFBR3LH3BV60 316 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 WWP2O00308 870 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 EPPINO95925 133 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 P04436 131 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 F7P08709 466 aaPredicted RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 CD53P19397 219 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 HNF4AP41235 474 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 HK2P52789 917 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 DHX9Q08211 1270 aaKnown RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 RUNX2Q13950 521 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 ELAVL1Q15717 326 aaKnown RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 PHKG1Q16816 387 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 CATSPEREQ5SY80 951 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 FBXW10Q5XX13 1052 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 POMZP3Q6PJE2 187 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 FAM47EQ6ZV65 393 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 MAATS1Q7Z4T9 603 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 KIAA1328Q86T90 577 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 KIF18BQ86Y91 864 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 ULK2Q8IYT8 1036 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 FBXW8Q8N3Y1 598 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 ANKRD53Q8N9V6 530 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 MORN4Q8NDC4 146 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 OR8K3Q8NH51 312 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 PYCR2Q96C36 320 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 SPNS1Q9H2V7 528 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 EXO5Q9H790 373 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 ADAP2Q9NPF8 381 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 PRTFDC1Q9NRG1 225 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 TRMT6Q9UJA5 497 aaKnown RBP11.37□□□□□ -0.59
SRPRA-202ENST00000527817 CLCA3PQ9Y6N3 262 aa11.37□□□□□ -0.59
SRPRA-202ENST00000527817 ZCWPW2A0A1B0GU75 182 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 TUBAL3A6NHL2 446 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ARHGEF9O43307 516 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ENDOUP21128 410 aaKnown RBP11.36□□□□□ -0.59
SRPRA-202ENST00000527817 BMP5P22003 454 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 TACR1P25103 407 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 PPP2R1BP30154 601 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 TIMP3P35625 211 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 SLC1A2P43004 574 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 MAGEA6P43360 314 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 DNASE1L1P49184 302 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 AP1S2P56377 157 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 DCAF7P61962 342 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 REEP5Q00765 189 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 KIF5AQ12840 1032 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 BMPR2Q13873 1038 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 CASC4Q6P4E1 433 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 OPN5Q6U736 354 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 GSTA5Q7RTV2 222 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 CAND1Q86VP6 1230 aaKnown RBP11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ZNF595Q8IYB9 648 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 OR5L2Q8NGL0 311 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 CALML6Q8TD86 181 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 SLC5A11Q8WWX8 675 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ATL1Q8WXF7 558 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 DAZLQ92904 295 aaKnown RBP11.36□□□□□ -0.59
SRPRA-202ENST00000527817 NEIL2Q969S2 332 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 FBXL8Q96CD0 374 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 TRIM5Q9C035 493 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 AICDAQ9GZX7 198 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ZNF395Q9H8N7 513 aaPredicted RBP11.36□□□□□ -0.59
SRPRA-202ENST00000527817 PELI2Q9HAT8 420 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ACKR4Q9NPB9 350 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 SEMA4BQ9NPR2 832 aaPredicted RBP11.36□□□□□ -0.59
SRPRA-202ENST00000527817 SPRR3Q9UBC9 169 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 VTI1BQ9UEU0 232 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 FBXO5Q9UKT4 447 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 ATG4BQ9Y4P1 393 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms