RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KIAA1161Q6NSJ0 714 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TSSK4Q6SA08 328 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 CES3Q6UWW8 571 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SLC36A4Q6YBV0 504 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 COLCA1Q6ZS62 124 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 NEK10Q6ZWH5 1172 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ZNF534Q76KX8 674 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TRMT10CQ7L0Y3 403 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 HSD11B1LQ7Z5J1 315 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TECPR1Q7Z6L1 1165 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TMEM135Q86UB9 458 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TSPAN33Q86UF1 283 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TMEM200AQ86VY9 491 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 LONP2Q86WA8 852 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 KLBQ86Z14 1044 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FRMD1Q8N878 549 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FBXO36Q8NEA4 188 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 OR4K2Q8NGD2 314 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 OR2T34Q8NGX1 318 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 OR6Y1Q8NGX8 325 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 RLN3Q8WXF3 142 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 KLK6Q92876 244 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PEX13Q92968 403 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FAM131CQ96AQ9 280 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 EME1Q96AY2 570 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 AP2M1Q96CW1 435 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 MSI2Q96DH6 328 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 CFAP36Q96G28 342 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 RADILQ96JH8 1075 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 C9orf72Q96LT7 481 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 MCCC1Q96RQ3 725 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 C19orf43Q9BQ61 176 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FAM167BQ9BTA0 163 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 GPR174Q9BXC1 333 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SLC17A9Q9BYT1 436 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 MRM3Q9HC36 420 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 PREBQ9HCU5 417 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SEPSECSQ9HD40 501 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 PPANQ9NQ55 473 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 NLE1Q9NVX2 485 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 WSB2Q9NYS7 404 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 IL17CQ9P0M4 197 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 AASSQ9UDR5 926 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 KCND3Q9UK17 655 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 APPL1Q9UKG1 709 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FBXO4Q9UKT5 387 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 CHMP2BQ9UQN3 213 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ITM2BQ9Y287 266 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ARL5AQ9Y689 179 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TEX264Q9Y6I9 313 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FAM169AQ9Y6X4 670 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 F5P12259 2224 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DOCK9Q9BZ29 2069 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 TRPM6Q9BX84 2022 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 MYLKQ15746 1914 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 IGHV1OR15-9A0A0B4J2B8 117 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 A0A0G2JK05 382 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 GLYATL1P3A0A0U1RQE8 302 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 A0A1W2PPH5 198 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CCDC162PA2VCL2 907 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CXorf65A6NEN9 183 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 FOXO6A8MYZ6 492 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 H3BNX3 289 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CCL22O00626 93 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SLC31A1O15431 190 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DOK2O60496 412 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SPAG6O75602 509 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 RECQL5O94762 991 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 NDUFB8O95169 186 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 EPN2O95208 641 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 VAPBO95292 243 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 PSG1P11464 419 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 LHCGRP22888 699 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 MAT2AP31153 395 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 PHBP35232 272 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 NUDT1P36639 197 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 PPARGP37231 505 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 SPAM1P38567 509 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 MMP12P39900 470 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 GPR1P46091 355 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CCR5P51681 352 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 STC1P52823 247 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 NR1H2P55055 460 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 GPX6P59796 221 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DCAF7P61962 342 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CREB5Q02930 508 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 ACVR1Q04771 509 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 THOC5Q13769 683 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 FASTKD3Q14CZ7 662 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 ZNF284Q2VY69 593 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 ZNF528Q3MIS6 628 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SETMARQ53H47 684 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 FASTKD1Q53R41 847 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 HSP90AA5PQ58FG0 334 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 TMEM31Q5JXX7 168 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SEL1L3Q68CR1 1132 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 NEPROQ6NW34 567 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 JMJD6Q6NYC1 403 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 EMBQ6PCB8 327 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 RFLNAQ6ZTI6 216 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms