RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLC36A3Q495N2 470 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 GPAT3Q53EU6 434 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 VASNQ6EMK4 673 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 VN1R5Q7Z5H4 357 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ISCA2Q86U28 154 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ANKRD46Q86W74 232 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TGIF2LXQ8IUE1 241 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ARL14Q8N4G2 192 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 GATAD2BQ8WXI9 593 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 KIAA1143Q96AT1 154 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TEFMQ96QE5 360 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 NPAS2Q99743 824 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 CRB3Q9BUF7 120 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 KCNH6Q9H252 994 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 SPNS1Q9H2V7 528 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RIBC2Q9H4K1 309 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 GDE1Q9NZC3 331 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RIMS3Q9UJD0 308 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 NDUFAF1Q9Y375 327 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 PPIL1Q9Y3C6 166 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ARL5AQ9Y689 179 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 DENND4CQ5VZ89 1909 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 A0A0D9SEW6 157 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TOX3O15405 576 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RAMP2O60895 175 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RLN2P04090 185 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 FGF4P08620 206 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 NUDT7P0C024 238 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 UMPSP11172 480 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 C6P13671 934 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TSPAN8P19075 237 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 HDCP19113 662 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 KCNQ1P51787 676 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 PLK1P53350 603 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 MS4A2Q01362 244 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR17Q13304 367 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM83EQ2M2I3 478 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR158Q5T848 1215 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 LHX8Q68G74 356 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF517Q6ZMY9 492 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TAS1R1Q7RTX1 841 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 CUZD1Q86UP6 607 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 KYQ8NBH2 561 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 OR13F1Q8NGS4 319 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 OR9A2Q8NGT5 310 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 PCNPQ8WW12 178 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RSC1A1Q92681 617 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 C19orf60Q96EN9 201 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 SEMA3CQ99985 751 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TLR8Q9NR97 1041 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM39AQ9NV64 488 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 MAP10Q9P2G4 905 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RPH3ALQ9UNE2 315 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR55Q9Y2T6 319 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 OR6C75A6NL08 312 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 H3BNC9 293 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 M0R3G1 203 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TRIM24O15164 1050 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CNOT4O95628 575 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 C9P02748 559 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF888P0CJ79 500 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 PRSS56P0CW18 603 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 PRPS2P11908 318 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CD1DP15813 335 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TACR2P21452 398 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 OR1E1P30953 314 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 PBX3P40426 434 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CRATP43155 626 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC11A1P49279 550 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SUOXP51687 545 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 AP1S1P61966 158 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 NFKB2Q00653 900 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 DGUOKQ16854 277 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 C10orf120Q5SQS8 335 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC27A4Q6P1M0 643 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CRTC3Q6UUV7 619 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 PGAM4Q8N0Y7 254 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC24A4Q8NFF2 622 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 OR1M1Q8NGA1 313 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 OR13C4Q8NGS5 318 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR150Q8NGU9 434 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF671Q8TAW3 534 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 L3HYPDHQ96EM0 354 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LINGO1Q96FE5 620 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 C7orf34Q96L11 122 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LRFN5Q96NI6 719 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ADAM19Q9H013 955 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 FBXO8Q9NRD0 319 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LOC100506127A0A0U1RQW1 187 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 C7orf72A4D263 438 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 E7ENX8 843 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ARVCFO00192 962 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CDC7O00311 574 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 MITFO75030 526 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ATG12O94817 140 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 EFEMP2O95967 443 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SERPINF2P08697 491 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ADORA3P0DMS8 318 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 WNT5AP41221 380 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms