RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 IL1RAPL1Q9NZN1 696 aa6.27□□□□□ -1.41
COPS4-209ENST00000511653 ABI3Q9P2A4 366 aa6.27□□□□□ -1.41
COPS4-209ENST00000511653 TRPC4Q9UBN4 977 aa6.27□□□□□ -1.41
COPS4-209ENST00000511653 SEC14L3Q9UDX4 400 aa6.27□□□□□ -1.41
COPS4-209ENST00000511653 TINAGQ9UJW2 476 aa6.27□□□□□ -1.41
COPS4-209ENST00000511653 TTC7AQ9ULT0 858 aaPredicted RBP6.27□□□□□ -1.41
COPS4-209ENST00000511653 TCAF1Q9Y4C2 921 aa6.27□□□□□ -1.41
COPS4-209ENST00000511653 PHF3Q92576 2039 aaKnown RBP6.27□□□□□ -1.41
COPS4-209ENST00000511653 LOC102723996A0A087X1L8 192 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 IGHV3-20A0A0C4DH32 117 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 OR5H15A6NDH6 313 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 FOXS1O43638 330 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 NIPSNAP2O75323 286 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SUN1O94901 812 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 RASAL1O95294 804 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 BMP10O95393 424 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 STATHP02808 62 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 UQCRHP07919 91 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 GAAP10253 952 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ERVK-10P10266 1014 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ETS1P14921 441 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ADRA1DP25100 572 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PTGER4P35408 488 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 NAP1L1P55209 391 aaKnown RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 PRAMEP78395 509 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CRADDP78560 199 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 TMED2Q15363 201 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 C3AR1Q16581 482 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 KCTD19Q17RG1 926 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 CTSL3PQ5NE16 218 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 FCRLBQ6BAA4 426 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 FBXO42Q6P3S6 717 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SUSD1Q6UWL2 747 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 TMEM207Q6UWW9 146 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PPP1R21Q6ZMI0 780 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 LANCL3Q6ZV70 420 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 LINC00523Q86TU6 105 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PAQR7Q86WK9 346 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CSNK1A1LQ8N752 337 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ZBTB34Q8NCN2 500 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ACRBPQ8NEB7 543 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SKA2Q8WVK7 121 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 RAD51AP1Q96B01 352 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 VPS50Q96JG6 964 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 IMMP1LQ96LU5 166 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 RAB11FIP5Q9BXF6 653 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ITGB1BP2Q9UKP3 347 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 RIMKLBQ9ULI2 386 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 A0A0A6YYC8 382 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 GOLGA6L9A6NEM1 432 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 OR2W5A6NFC9 320 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ARHGEF33A8MVX0 844 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 I3L1I5 382 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 CD3EAPO15446 510 aaKnown RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 PSMD3O43242 534 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SLC19A2O60779 497 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PRAMEF2O60811 474 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 FTCDO95954 541 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PTMAP06454 111 aaKnown RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 HEXBP07686 556 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 F7P08709 466 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 ERGP11308 486 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 COX6B1P14854 86 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 FDXRP22570 491 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CXCR2P25025 360 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CTSSP25774 331 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CYLC1P35663 651 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 SLC26A3P40879 764 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SLC6A9P48067 706 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 EIF3BP55884 814 aaKnown RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 ZNF33BQ06732 778 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 GBX1Q14549 363 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SPA17Q15506 151 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 OASLQ15646 514 aaKnown RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 PTRHD1Q6GMV3 140 aaKnown RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 TMEM205Q6UW68 189 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 RAD9BQ6WBX8 426 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 OTOAQ7RTW8 1153 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PRSS41Q7RTY9 318 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 OVCH2Q7RTZ1 564 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 PLD3Q8IV08 490 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CCDC170Q8IYT3 715 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 MMABQ96EY8 250 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 SIGLEC12Q96PQ1 595 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 OR2A5Q96R48 311 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 NPAS2Q99743 824 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 TSSK1BQ9BXA7 367 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ZNF700Q9H0M5 742 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 CHRAC1Q9NRG0 131 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 TREX1Q9NSU2 369 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 C14orf105Q9NVL8 296 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 SPATA7Q9P0W8 599 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 GALPQ9UBC7 116 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 GNPTGQ9UJJ9 305 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 EPN1Q9Y6I3 576 aaPredicted RBP6.26□□□□□ -1.41
COPS4-209ENST00000511653 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
COPS4-209ENST00000511653 ATRQ13535 2644 aa6.25□□□□□ -1.41
COPS4-209ENST00000511653 ERI2A8K979 691 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms