RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLC39A8Q9C0K1 460 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 PARLQ9H300 379 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 TMEM206Q9H813 350 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 KLK13Q9UKR3 277 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 ATP6V0A2Q9Y487 856 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKDD1BA6NHY2 528 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 M0R296 226 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 PDHXO00330 501 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 MLNRO43193 412 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 TNFSF12O43508 249 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 FMO6PO60774 539 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 STAM2O75886 525 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 GH1P01241 217 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 MAPK3P27361 379 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 SHC1P29353 583 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 FRKP42685 505 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 ABCE1P61221 599 aaKnown RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 ST8SIA6P61647 398 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 FKBP3Q00688 224 aaKnown RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 SLC3A1Q07837 685 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 MEP1BQ16820 701 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 UPP1Q16831 310 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 TDHQ8IZJ6 230 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 LYG1Q8N1E2 194 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 SLC43A2Q8N370 569 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 C10orf53Q8N6V4 93 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 KRT35Q92764 455 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 CDKN2AIPNLQ96HQ2 116 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF597Q96LX8 424 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 CFAP53Q96M91 514 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 TSGA13Q96PP4 275 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 PSMB7Q99436 277 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 ATF6BQ99941 703 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 SP140LQ9H930 580 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 ABCB8Q9NUT2 735 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 DNAJC17Q9NVM6 304 aaKnown RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 GTSE1Q9NYZ3 720 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 LEF1Q9UJU2 399 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF510Q9Y2H8 683 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 TMED7Q9Y3B3 224 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 SPATA31D1Q6ZQQ2 1576 aa4.02□□□□□ -1.77
HMGB1P38-201ENST00000490557 IGLV4-3A0A075B6K6 122 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 A0A0U1RQK1 487 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF320A2RRD8 509 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ERI2A8K979 691 aaKnown RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 TMCO5BA8MYB1 307 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 EPM2AB3EWF7 344 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 RNF103O00237 685 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 PI15O43692 258 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 KERAO60938 352 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ATP9AO75110 1047 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 GAP43P17677 238 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 RPL9P32969 192 aaKnown RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 FKBP1BP68106 108 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF146Q15072 292 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 MLF2Q15773 248 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 C2orf76Q3KRA6 126 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 RFTN2Q52LD8 501 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF343Q6P1L6 599 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 PODNL1Q6PEZ8 512 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 PIWIL3Q7Z3Z3 882 aaKnown RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 AQP12AQ8IXF9 295 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 SYCP3Q8IZU3 236 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 SPATA18Q8TC71 538 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 SMPDL3AQ92484 453 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ATP6V0A1Q93050 837 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 CABS1Q96KC9 395 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 RUNDC3BQ96NL0 473 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 SOSTQ9BQB4 213 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 PYGO2Q9BRQ0 406 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 STRADBQ9C0K7 418 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 MMADHCQ9H3L0 296 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 TUBB1Q9H4B7 451 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 VIPAS39Q9H9C1 493 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 MRPS18CQ9Y3D5 142 aaKnown RBP4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 AUP1Q9Y679 476 aa4.01□□□□□ -1.77
HMGB1P38-201ENST00000490557 ACEP12821 1306 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 SYNJ2BP-COX16A0A087WUM0 186 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 IGHV3-20A0A0C4DH32 117 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 IGHV3-38A0A0C4DH36 116 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 C13orf42A0A1B0GVH6 325 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 LMO7DNF2Z398 122 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 B4GAT1O43505 415 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 SNAP91O60641 907 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 IGHV3-13P01766 116 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 LYNP07948 512 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 GSTA2P09210 222 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 PCP11498 1178 aaKnown RBP4□□□□□ -1.77
HMGB1P38-201ENST00000490557 CPA3P15088 417 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 CD1DP15813 335 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 EDNRAP25101 427 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 FCGR2BP31994 310 aaPredicted RBP4□□□□□ -1.77
HMGB1P38-201ENST00000490557 FCGR2CP31995 323 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 TNNT2P45379 298 aaPredicted RBP4□□□□□ -1.77
HMGB1P38-201ENST00000490557 SNU13P55769 128 aaKnown RBP4□□□□□ -1.77
HMGB1P38-201ENST00000490557 SRPXP78539 464 aa4□□□□□ -1.77
HMGB1P38-201ENST00000490557 SLC34A1Q06495 639 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms