RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CCDC43Q96MW1 224 aaKnown RBP3.26□□□□□ -1.89
CD46-216ENST00000490278 GUCD1Q96NT3 240 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 RBM4BQ9BQ04 359 aaKnown RBP3.26□□□□□ -1.89
CD46-216ENST00000490278 PINK1Q9BXM7 581 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 ZNF665Q9H7R5 613 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 MAGEF1Q9HAY2 307 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 KCNK13Q9HB14 408 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 GPN1Q9HCN4 374 aaPredicted RBP3.26□□□□□ -1.89
CD46-216ENST00000490278 S100A14Q9HCY8 104 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 UBE2TQ9NPD8 197 aaPredicted RBP3.26□□□□□ -1.89
CD46-216ENST00000490278 MAD2L2Q9UI95 211 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 MUTYHQ9UIF7 546 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 PSORS1C1Q9UIG5 152 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 ERVK-19Q9WJR5 959 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 UMODL1Q5DID0 1318 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 IGHV3OR16-10A0A075B7F0 116 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 A0A1B0GU03 582 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 ATP6AP2A0A1C7CYW4 349 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 SRRM4A7MD48 611 aaKnown RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 EPM2AB3EWF7 344 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 ANHXE9PGG2 379 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 NTN3O00634 580 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 KINO60870 393 aaKnown RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 ANPEPP15144 967 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 FCGR2BP31994 310 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 FCGR2CP31995 323 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 OR1D2P34982 312 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 CRYBA2P53672 197 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 ABCE1P61221 599 aaKnown RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 SPHARQ15513 63 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 MLF2Q15773 248 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 C2orf76Q3KRA6 126 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 RFTN2Q52LD8 501 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 CD164L2Q6UWJ8 174 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 ZNF713Q8N859 430 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 SPC24Q8NBT2 197 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 ZNF485Q8NCK3 441 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 MAPK1IP1LQ8NDC0 245 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 TRPV3Q8NET8 790 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 GPR148Q8TDV2 347 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 KRT35Q92764 455 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 FAM46BQ96A09 425 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 C5orf30Q96GV9 206 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 PDLIM5Q96HC4 596 aaKnown RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 ERGIC2Q96RQ1 377 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 DDX50Q9BQ39 737 aaKnown RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 TSPYL1Q9H0U9 437 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 MID1IP1Q9NPA3 183 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 IL1RAPQ9NPH3 570 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 MED17Q9NVC6 651 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 PLEK2Q9NYT0 353 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 THAP10Q9P2Z0 257 aaPredicted RBP3.25□□□□□ -1.89
CD46-216ENST00000490278 UBQLN2Q9UHD9 624 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 KCNK6Q9Y257 313 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 SH3GLB1Q9Y371 365 aa3.25□□□□□ -1.89
CD46-216ENST00000490278 SLC15A5A6NIM6 579 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 CCSO14618 274 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 B4GAT1O43505 415 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 SNAP91O60641 907 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 NUDT17P0C025 328 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 ADORA3P0DMS8 318 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 EZRP15311 586 aaKnown RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 RPL9P32969 192 aaKnown RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 CCR4P51679 360 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 FKBP3Q00688 224 aaKnown RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 GABPAQ06546 454 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 RBBP4Q09028 425 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 GIT2Q14161 759 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 ZNF146Q15072 292 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 ZNF772Q68DY9 489 aaPredicted RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 RAPH1Q70E73 1250 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 FAM131BQ86XD5 332 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 CACUL1Q86Y37 369 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 OR4N5Q8IXE1 308 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 CLEC1AQ8NC01 280 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 CCDC197Q8NCU1 140 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 SPPL2AQ8TCT8 520 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 MIPOL1Q8TD10 442 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 ST7LQ8TDW4 575 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 NPRL2Q8WTW4 380 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 LIPHQ8WWY8 451 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 PRCCQ92733 491 aaPredicted RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 HAS2Q92819 552 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 C11orf52Q96A22 123 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 CABS1Q96KC9 395 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 SSX3Q99909 188 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 RSPH9Q9H1X1 276 aaPredicted RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 TEKT2Q9UIF3 430 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 FOXA2Q9Y261 457 aaPredicted RBP3.24□□□□□ -1.89
CD46-216ENST00000490278 EXOC6BQ9Y2D4 811 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 MOB4Q9Y3A3 225 aa3.24□□□□□ -1.89
CD46-216ENST00000490278 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 C5orf51A6NDU8 294 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 A8MXK9 166 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 PSMD3O43242 534 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 STBD1O95210 358 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 POP4O95707 220 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms