RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 OC90Q02509 493 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PCDH1Q08174 1060 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CHIT1Q13231 466 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 C8orf74Q6P047 294 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CLNKQ7Z7G1 428 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 LAS2Q8IYD9 372 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CPSF7Q8N684 471 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ZNF473Q8WTR7 871 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 THAP3Q8WTV1 239 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 KCTD4Q8WVF5 259 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 NCLNQ969V3 563 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 FAR2Q96K12 515 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 F2RL3Q96RI0 385 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SERINC2Q96SA4 455 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CD244Q9BZW8 370 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 COPS7BQ9H9Q2 264 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ADAP2Q9NPF8 381 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PRTFDC1Q9NRG1 225 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 KCMF1Q9P0J7 381 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SH3BGRL2Q9UJC5 107 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TINAGQ9UJW2 476 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ZNF835Q9Y2P0 537 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 FREM3P0C091 2139 aa10.46□□□□□ -0.74
RAB11FIP3-210ENST00000487899 TEP1Q99973 2627 aaKnown RBP10.46□□□□□ -0.74
RAB11FIP3-210ENST00000487899 A0A088AWK7 358 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 TRGV8A0A0C4DH27 118 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 K7EPI3 171 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 RTCAO00442 366 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CDK2AP1O14519 115 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 H2AFYO75367 372 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ITGA10O75578 1167 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 S100BP04271 92 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 LTA4HP09960 611 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MYBL2P10244 700 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ZNF24P17028 368 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ZNF10P21506 573 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 GRNP28799 593 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ECHS1P30084 290 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MSH2P43246 934 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CYB561P49447 251 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 HLCSP50747 726 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CLCN2P51788 898 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MTTPP55157 894 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 HSF1Q00613 529 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 IRF8Q02556 426 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 SLC13A2Q13183 592 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 NAA30Q147X3 362 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 SETDB1Q15047 1291 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 C3AR1Q16581 482 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 PAGE2BQ5JRK9 111 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 GRHL2Q6ISB3 625 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 C16orf47Q6ZP98 133 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 Q6ZPB1 254 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 RAPH1Q70E73 1250 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 FGD2Q7Z6J4 655 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 TBC1D1Q86TI0 1168 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 TICAM1Q8IUC6 712 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ZNF595Q8IYB9 648 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 RNF175Q8N4F7 328 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ARMC2Q8NEN0 867 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 STAG3L4Q8TBR4 150 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 NXNL1Q96CM4 212 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 VMP1Q96GC9 406 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 C16orf45Q96MC5 204 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 KCNC2Q96PR1 638 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 LRRC1Q9BTT6 524 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 NMRAL1Q9HBL8 299 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 SNX15Q9NRS6 342 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 NINJ2Q9NZG7 142 aa10.45□□□□□ -0.74
RAB11FIP3-210ENST00000487899 LRRC14BA6NHZ5 514 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 NPIPA5E9PKD4 350 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 FCHO1O14526 889 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ZNHIT1O43257 154 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 C2P06681 752 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 HIST1H1TP22492 207 aaPredicted RBP10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ATP5A1P25705 553 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CRABP2P29373 138 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 HPDP32754 393 aaPredicted RBP10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 PTGER1P34995 402 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MAGEA12P43365 314 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ADORA2A-AS1P86434 159 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ALDH6A1Q02252 535 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 LAPTM5Q13571 262 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CDSNQ15517 529 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ELAVL1Q15717 326 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.741e-6■□□□□ 10.6
RAB11FIP3-210ENST00000487899 SLC25A25Q6KCM7 469 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MDGA2Q7Z553 956 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CYP4Z2PQ8N1L4 340 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 HORMAD2Q8N7B1 307 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ZNF321PQ8N8H1 164 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ACOT4Q8N9L9 421 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 OR7G3Q8NG95 312 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 RHEBL1Q8TAI7 183 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MAGED4Q96JG8 741 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 GPR78Q96P69 363 aa10.44□□□□□ -0.74
RAB11FIP3-210ENST00000487899 MAPKAP1Q9BPZ7 522 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms