RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ADAMTS16Q8TE57 1224 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 BMFQ96LC9 184 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 AMBRA1Q9C0C7 1298 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 ING2Q9H160 280 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 EPS8L2Q9H6S3 715 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 CXorf36Q9H7Y0 433 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 OR6C2Q9NZP2 312 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 THEGQ9P2T0 379 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 TMEFF2Q9UIK5 374 aaPredicted RBP19.38■□□□□ 0.69
HPS3-206ENST00000486530 PCOLCE2Q9UKZ9 415 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 CA5BQ9Y2D0 317 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 PADI2Q9Y2J8 665 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 MAP4K5Q9Y4K4 846 aa19.38■□□□□ 0.69
HPS3-206ENST00000486530 PRAMEF33A0A0G2JMD5 474 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 MYO1GB0I1T2 1018 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 HAT1O14929 419 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 VILLO15195 856 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 AHCYL1O43865 530 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 PRKACGP22612 351 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 FRKP42685 505 aaPredicted RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 SELENOWP63302 87 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 EEF1A2Q05639 463 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 LRRC32Q14392 662 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 SMAD2Q15796 467 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 DCP2Q8IU60 420 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 NFKBIDQ8NI38 313 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 C7orf34Q96L11 122 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 REEP1Q9H902 201 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 MDC1Q14676 2089 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 ARAFP10398 606 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 IGFBP5P24593 272 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 AKT2P31751 481 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 ARFIP1P53367 373 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 PLA2G16P53816 162 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 MANFP55145 182 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 CASP9P55211 416 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 PCBP4P57723 403 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 CDK6Q00534 326 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 ADPRMQ3LIE5 342 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 ANKRD34AQ69YU3 496 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 AMIGO1Q86WK6 493 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 FBXL6Q8N531 539 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 NEURL3Q96EH8 262 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 ZBED6CLQ96FA7 236 aaPredicted RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 MSANTD3Q96H12 275 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 TEFMQ96QE5 360 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 C17orf62Q9BQA9 187 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 DPH7Q9BTV6 452 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 SLAMF7Q9NQ25 335 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 SLC2A4RGQ9NR83 387 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 TEX10Q9NXF1 929 aaPredicted RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 SPHK1Q9NYA1 384 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 ANGPT4Q9Y264 503 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 SAMHD1Q9Y3Z3 626 aaKnown RBP19.37■□□□□ 0.69
HPS3-206ENST00000486530 SNX8Q9Y5X2 465 aa19.37■□□□□ 0.69
HPS3-206ENST00000486530 FANCMQ8IYD8 2048 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 CCDC160A6NGH7 325 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 TMEM229AB2RXF0 380 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 ITGAMP11215 1152 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 DRD2P14416 443 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 GABRG2P18507 467 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 AK4P27144 223 aaPredicted RBP19.36■□□□□ 0.69
HPS3-206ENST00000486530 PIGAP37287 484 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 TPD52P55327 224 aaPredicted RBP19.36■□□□□ 0.69
HPS3-206ENST00000486530 SH3BGRP55822 239 aaPredicted RBP19.36■□□□□ 0.69
HPS3-206ENST00000486530 DSTNP60981 165 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 YPEL5P62699 121 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 IQCCQ4KMZ1 466 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 TPRG1LQ5T0D9 272 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 SAXO2Q658L1 398 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 CEP68Q76N32 757 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 FAM20CQ8IXL6 584 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 TMEM145Q8NBT3 493 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 LCN9Q8WX39 176 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 LZICQ8WZA0 190 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 AICDAQ9GZX7 198 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 ABCG4Q9H172 646 aa19.36■□□□□ 0.69
HPS3-206ENST00000486530 SLC16A6O15403 523 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 DIRAS1O95057 198 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 EML2O95834 649 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 IFNA14P01570 189 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 CHRM5P08912 532 aaPredicted RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 SRFP11831 508 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 FOSL2P15408 326 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 ACTR1BP42025 376 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 HLCSP50747 726 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 ACTR1AP61163 376 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 IL18R1Q13478 541 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 CRB2Q5IJ48 1285 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 RD3Q7Z3Z2 195 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 TSACCQ96A04 125 aaPredicted RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 EXOSC8Q96B26 276 aaKnown RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 EPYCQ99645 322 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 FAIM2Q9BWQ8 316 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 TMEM121BQ9BXQ6 578 aaPredicted RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 ACSS1Q9NUB1 689 aaPredicted RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 DDX18Q9NVP1 670 aaKnown RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 TAS2R7Q9NYW3 318 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 EHD3Q9NZN3 535 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 SNX7Q9UNH6 387 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms