RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MAOAP21397 527 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CPN2P22792 545 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 HSD3B2P26439 372 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 SERPINB3P29508 390 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 BSGP35613 385 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CCL11P51671 97 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 HNRNPFP52597 415 aaKnown RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 BTG2P78543 158 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 RHAGQ02094 409 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CSTF3Q12996 717 aaKnown RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 SLAMF1Q13291 335 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 ABRAXAS2Q15018 415 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 NSDHLQ15738 373 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CHI3L2Q15782 390 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 ARL13AQ5H913 290 aaPredicted RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 DCAF10Q5QP82 559 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 MED25Q71SY5 747 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CLNKQ7Z7G1 428 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 TMEM102Q8N9M5 508 aaPredicted RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 TMEM52Q8NDY8 209 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 OR11G2Q8NGC1 345 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 AGR3Q8TD06 166 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 FER1L6-AS2Q96M78 137 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 PTCHD1Q96NR3 888 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 UBL7Q96S82 380 aaPredicted RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 ACPTQ9BZG2 426 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 ING2Q9H160 280 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 VIPAS39Q9H9C1 493 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 BRF2Q9HAW0 419 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 LYRM4Q9HD34 91 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 PRTFDC1Q9NRG1 225 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 NMRK1Q9NWW6 199 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 NKIRAS1Q9NYS0 192 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 AHSPQ9NZD4 102 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 C19orf25Q9UFG5 118 aaPredicted RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 MRPS33Q9Y291 106 aaKnown RBP11.15□□□□□ -0.62
HPS4-214ENST00000485842 LAMA5O15230 3695 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 MGAQ8IWI9 3026 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 A0A0A6YYD5 115 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 NSG1A0A0A6YYJ2 146 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 IGHV3-20A0A0C4DH32 117 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 A6NL46 340 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 TMEM233B4DJY2 109 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 AZIN1O14977 448 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 BIRC5O15392 142 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 TMPRSS11DO60235 418 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 SASH3O75995 380 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 HSPA4LO95757 839 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 SERPINE1P05121 402 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 CYC1P08574 325 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 DHRS4L1P0CG22 281 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 UROSP10746 265 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 COX6A1P12074 109 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 TSFMP43897 325 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 ARFIP1P53367 373 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 HNRNPH2P55795 449 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 HMGCS1Q01581 520 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 RAPSNQ13702 412 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 LY6DQ14210 128 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 IMPG1Q17R60 797 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 TTMPQ5BVD1 217 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 SH2D4BQ5SQS7 431 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 CYP20A1Q6UW02 462 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 TMEM205Q6UW68 189 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 QSOX2Q6ZRP7 698 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 PAGE2Q7Z2X7 111 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 COMMD6Q7Z4G1 85 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 PARP9Q8IXQ6 854 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 METTL4Q8N3J2 472 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 ZCCHC7Q8N3Z6 543 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 C1orf52Q8N6N3 182 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 GBP7Q8N8V2 638 aaPredicted RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 CLEC1AQ8NC01 280 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 NACC2Q96BF6 587 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 ATP6V1G3Q96LB4 118 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 DDX31Q9H8H2 851 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 ZNF160Q9HCG1 818 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 PRDM9Q9NQV7 894 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 LYARQ9NX58 379 aaKnown RBP11.14□□□□□ -0.63
HPS4-214ENST00000485842 KCMF1Q9P0J7 381 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 PHF11Q9UIL8 331 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
HPS4-214ENST00000485842 IGHV1-45A0A0A0MS14 117 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 MYOCOSA0A1B0GUC4 107 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 ARHGAP10A1A4S6 786 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 CYR61O00622 381 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 CLDN4O14493 209 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 PCDH17O14917 1159 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 LYPLA1O75608 230 aaPredicted RBP11.13□□□□□ -0.63
HPS4-214ENST00000485842 SEC24DO94855 1032 aaPredicted RBP11.13□□□□□ -0.63
HPS4-214ENST00000485842 CHEK2O96017 543 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 HPP00738 406 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 KLK1P06870 262 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 FAM58BPP0C7Q3 252 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms