RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 CLOCKO15516 846 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 DEAF1O75398 565 aaPredicted RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 NUDT7P0C024 238 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 SLC35G6P0C7Q6 338 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 DRD2P14416 443 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 CERS1P27544 350 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 TSFMP43897 325 aaKnown RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 CXCL12P48061 93 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 MANFP55145 182 aaKnown RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 TMTC4Q5T4D3 741 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 PPP4R4Q6NUP7 873 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 FBXO42Q6P3S6 717 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 SLC36A4Q6YBV0 504 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 OOSP2Q86WS3 158 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 EID3Q8N140 333 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 ZCCHC7Q8N3Z6 543 aaKnown RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 OR5P2Q8WZ92 322 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 GAL3ST3Q96A11 431 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 ZNF597Q96LX8 424 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 NR1H4Q96RI1 486 aaPredicted RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 TRIM4Q9C037 500 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 KLHL25Q9H0H3 589 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 MAGIXQ9H6Y5 334 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 RAPGEFL1Q9UHV5 662 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 FAF1Q9UNN5 650 aaPredicted RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 SAMD4AQ9UPU9 718 aaKnown RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 SIT1Q9Y3P8 196 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 SPAG17Q6Q759 2223 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 A0A0J9YVX5 310 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 EIF4E1BA6NMX2 242 aaKnown RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 CTSVO60911 334 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 GUCY1B2O75343 617 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 IL1RNP18510 177 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 UQCRC2P22695 453 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 MVDP53602 400 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 VEZF1Q14119 521 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 C16orf72Q14CZ0 275 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 COX20Q5RI15 118 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 MRM1Q6IN84 353 aaKnown RBP15.87■□□□□ 0.13
CTSA-207ENST00000484855 GKN2Q86XP6 184 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 CBR4Q8N4T8 237 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 PACRGLQ8N7B6 248 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 LMX1AQ8TE12 382 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 RAD21L1Q9H4I0 556 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 CXorf36Q9H7Y0 433 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 NEUROD4Q9HD90 331 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 EVA1BQ9NVM1 165 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 GPATCH2Q9NW75 528 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 DOLKQ9UPQ8 538 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 SNX8Q9Y5X2 465 aa15.87■□□□□ 0.13
CTSA-207ENST00000484855 A0A0J9YY10 115 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 RNF103-CHMP3A0A140T963 221 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 PDLIM1O00151 329 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 FKBP9O95302 570 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 KRT75O95678 551 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 ZNF682O95780 498 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 ETFAP13804 333 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 BCKDHBP21953 392 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 CASP9P55211 416 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 PCBP4P57723 403 aaKnown RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 FADDQ13158 208 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 KCT2Q8NC54 265 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 C11orf65Q8NCR3 313 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 UCN3Q969E3 161 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 ZBED6CLQ96FA7 236 aaPredicted RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 PYURFQ96I23 114 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 OR2A5Q96R48 311 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 NLNQ9BYT8 704 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 EHD3Q9NZN3 535 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 FBXW2Q9UKT8 454 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 ASB4Q9Y574 426 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 C7orf72A4D263 438 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 OR5K3A6NET4 321 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 K7ESF4 209 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 DENRO43583 198 aaKnown RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 ZNF888P0CJ79 500 aaPredicted RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 PVRP15151 417 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 HOXB6P17509 224 aaKnown RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 KDELR2P33947 212 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 PCGF2P35227 344 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 FRKP42685 505 aaPredicted RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 LSSP48449 732 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 MAZP56270 477 aaKnown RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 HSPB3Q12988 150 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 C6orf52Q5T4I8 152 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 GCNT6Q5T4J0 391 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 PRPF38BQ5VTL8 546 aaKnown RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 SPRED1Q7Z699 444 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 RNF130Q86XS8 419 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 TMEFF1Q8IYR6 380 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 N4BP2L2Q92802 583 aaPredicted RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 MAL2Q969L2 176 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 ZFYVE21Q9BQ24 234 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 TMEM121BQ9BXQ6 578 aaPredicted RBP15.86■□□□□ 0.13
CTSA-207ENST00000484855 RPS6KA6Q9UK32 745 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 UTS2RQ9UKP6 389 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 MAP4K5Q9Y4K4 846 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 KLK4Q9Y5K2 254 aa15.86■□□□□ 0.13
CTSA-207ENST00000484855 THADAQ6YHU6 1953 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms