RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PAGE2Q7Z2X7 111 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 MMP21Q8N119 569 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 FNDC5Q8NAU1 212 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 CLHC1Q8NHS4 586 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 RFWD2Q8NHY2 731 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 CHTF18Q8WVB6 975 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 KCNE4Q8WWG9 221 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 MARK4Q96L34 752 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 LRFN5Q96NI6 719 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 B3GNT4Q9C0J1 378 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 ROGDIQ9GZN7 287 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 GPN2Q9H9Y4 310 aaPredicted RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 ENAMQ9NRM1 1142 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 C1orf109Q9NX04 203 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF282Q9UDV7 671 aaPredicted RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 PPT2Q9UMR5 302 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 G3BP2Q9UN86 482 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 PTRH2Q9Y3E5 179 aaKnown RBP12.5□□□□□ -0.41
HDAC1-208ENST00000482310 MAP4K5Q9Y4K4 846 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 CCL27Q9Y4X3 112 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 ATRXP46100 2492 aa12.5□□□□□ -0.41
HDAC1-208ENST00000482310 ACACAQ13085 2346 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 SERTM1A2A2V5 107 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 GLOD5A6NK44 160 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 TRPC5OSA6NMA1 111 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 TAF4O00268 1085 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 KLK10O43240 276 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 MYO1DO94832 1006 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 CAPNS1P04632 268 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 FAM58BPP0C7Q3 252 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 RNH1P13489 461 aaKnown RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 CPN2P22792 545 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 F8A1P23610 371 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 ALDH9A1P49189 494 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 HK2P52789 917 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 AQP5P55064 265 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 RAB38P57729 211 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF33BQ06732 778 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 CLN3Q13286 438 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 MAP7Q14244 749 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 RFTN2Q52LD8 501 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 C18orf63Q68DL7 685 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 OVCH1Q7RTY7 1134 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 KIRREL3Q8IZU9 778 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 STT3BQ8TCJ2 826 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 UCN3Q969E3 161 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 GFM2Q969S9 779 aaKnown RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 MIEF2Q96C03 454 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 SLC45A3Q96JT2 553 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 PPP3R2Q96LZ3 170 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 DPH2Q9BQC3 489 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 EBF4Q9BQW3 602 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 AKTIPQ9H8T0 292 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 MEAF6Q9HAF1 191 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 PFDN4Q9NQP4 134 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 TEX10Q9NXF1 929 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-208ENST00000482310 FAM53CQ9NYF3 392 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 VTI1BQ9UEU0 232 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 IL17BQ9UHF5 180 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 DLGAP4Q9Y2H0 992 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 APC2O95996 2303 aa12.49□□□□□ -0.41
HDAC1-208ENST00000482310 A0A0G2JND7 137 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 SLCO1B7G3V0H7 640 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 LRATO95237 230 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ANXA4P09525 319 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ZGLP1P0C6A0 271 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 FOLR3P41439 243 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 HNRNPFP52597 415 aaKnown RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 SEC24CP53992 1094 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 RPS15P62841 145 aaKnown RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ID2Q02363 134 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 KLC1Q07866 573 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 NKG7Q16617 165 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 CGB2Q6NT52 195 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 NIPAL1Q6NVV3 410 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 NOXRED1Q6NXP6 359 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 GPR180Q86V85 440 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 LAPTM4BQ86VI4 370 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 DTX1Q86Y01 620 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 LIX1Q8N485 282 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF248Q8NDW4 579 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 TMEM52Q8NDY8 209 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 KIAA1143Q96AT1 154 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 TSSK3Q96PN8 268 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 OR52B2Q96RD2 323 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ACTL8Q9H568 366 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 CCDC134Q9H6E4 229 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 MKKSQ9NPJ1 570 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 LYARQ9NX58 379 aaKnown RBP12.48□□□□□ -0.41
HDAC1-208ENST00000482310 C5AR2Q9P296 337 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 MCM8Q9UJA3 840 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 DAPP1Q9UN19 280 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms