RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KIR2DS5Q14953 304 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 SLC5A12Q1EHB4 618 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 ABHD17CQ6PCB6 329 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 TMEM64Q6YI46 380 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 PAQR7Q86WK9 346 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 DCP2Q8IU60 420 aaKnown RBP20.7■□□□□ 0.9
CCM2-206ENST00000474617 C8orf59Q8N0T1 100 aaPredicted RBP20.7■□□□□ 0.9
CCM2-206ENST00000474617 NT5CQ8TCD5 201 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 HMGB4Q8WW32 186 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 MS4A6EQ96DS6 147 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 THSD1Q9NS62 852 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 GPATCH2Q9NW75 528 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 PCDHGB3Q9Y5G1 929 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 HSPE1-MOB4S4R3N1 261 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 A0A1W2PPC1 479 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 TMEM247A6NEH6 219 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 URADA6NGE7 173 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 ISM1B1AKI9 464 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 SLC16A6O15403 523 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 RASGRP1O95267 797 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 IGFBP4P22692 258 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 NTSP30990 170 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 BLKP51451 505 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 DSTNP60981 165 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 TOP3AQ13472 1001 aaPredicted RBP20.69■□□□□ 0.9
CCM2-206ENST00000474617 TDGQ13569 410 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 ALG11Q2TAA5 492 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 IFI44LQ53G44 452 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 RBM48Q5RL73 367 aaKnown RBP20.69■□□□□ 0.9
CCM2-206ENST00000474617 MRM1Q6IN84 353 aaKnown RBP20.69■□□□□ 0.9
CCM2-206ENST00000474617 Q6ZSR6 202 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 THAP5Q7Z6K1 395 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 ARMC8Q8IUR7 673 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 SAMD14Q8IZD0 417 aaPredicted RBP20.69■□□□□ 0.9
CCM2-206ENST00000474617 ZNF786Q8N393 782 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 AVL9Q8NBF6 648 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 GPBAR1Q8TDU6 330 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 RASSF5Q8WWW0 418 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 TSC22D3Q99576 134 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 TRIM4Q9C037 500 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 PRO3102Q9H379 93 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 SEMA3GQ9NS98 782 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 RAPGEFL1Q9UHV5 662 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 BLOC1S6Q9UL45 172 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 PCDHGB5Q9Y5G0 923 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 HEATR5BQ9P2D3 2071 aa20.69■□□□□ 0.9
CCM2-206ENST00000474617 A8MVJ9 347 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 HAT1O14929 419 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 ZW10O43264 779 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 KIF1CO43896 1103 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 TMPRSS11DO60235 418 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 UGT2B11O75310 529 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 GNAO1P09471 354 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 ETFAP13804 333 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 EFNA1P20827 205 aaPredicted RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 PEBP1P30086 187 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 ALDH9A1P49189 494 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 PCBP3P57721 371 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 ESRRGP62508 458 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 REEP3Q6NUK4 255 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 RNF130Q86XS8 419 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 TRIM48Q8IWZ4 208 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 SETD9Q8NE22 299 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 SFXN5Q8TD22 340 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 GEMIN6Q8WXD5 167 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 GAL3ST3Q96A11 431 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 C7orf34Q96L11 122 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 GAS2L1Q99501 681 aaPredicted RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 SORBS1Q9BX66 1292 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 PCED1AQ9H1Q7 454 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 TOR3AQ9H497 397 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 GPR27Q9NS67 375 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 FAM118AQ9NWS6 357 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 ZNF624Q9P2J8 865 aaPredicted RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 MRPS17Q9Y2R5 130 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 ATG2BQ96BY7 2078 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 SHISA7A6NL88 538 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 RTCAO00442 366 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 VILLO15195 856 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 PGM3O95394 542 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 C9P02748 559 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 ZNF10P21506 573 aaPredicted RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 KCNJ10P78508 379 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 GNA13Q14344 377 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 NDUFAF5Q5TEU4 345 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 FOXB2Q5VYV0 432 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 TSACCQ96A04 125 aaPredicted RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 TEFMQ96QE5 360 aaKnown RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 C17orf62Q9BQA9 187 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 TMEM168Q9H0V1 697 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 ING2Q9H160 280 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 CXorf36Q9H7Y0 433 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 UBE2ZQ9H832 354 aaPredicted RBP20.68■□□□□ 0.9
CCM2-206ENST00000474617 SLC35C2Q9NQQ7 365 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 GIMAP4Q9NUV9 329 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 PSME2Q9UL46 239 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 COMMD3-BMI1R4GMX3 469 aa20.68■□□□□ 0.9
CCM2-206ENST00000474617 CDH23Q9H251 3354 aa20.67■□□□□ 0.9
CCM2-206ENST00000474617 PLOD2O00469 737 aa20.67■□□□□ 0.9
CCM2-206ENST00000474617 ERI3O43414 337 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms