RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CFAP36Q96G28 342 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 WDR83Q9BRX9 315 aaKnown RBP18.41■□□□□ 0.54
VARS-221ENST00000463184 UCK2Q9BZX2 261 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 AICDAQ9GZX7 198 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 SAYSD1Q9NPB0 183 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 NPDC1Q9NQX5 325 aaPredicted RBP18.41■□□□□ 0.54
VARS-221ENST00000463184 PRTFDC1Q9NRG1 225 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 KCMF1Q9P0J7 381 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 TNFRSF10DQ9UBN6 386 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 NKX2-6A6NCS4 301 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 SYNDIG1LA6NDD5 238 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 FAM90A27PA6NNH2 459 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 A8MVJ9 347 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 H2AFYO75367 372 aaKnown RBP18.4■□□□□ 0.54
VARS-221ENST00000463184 KRT38O76015 456 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 CDKL1Q00532 357 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 RUNX2Q13950 521 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 EMC4Q5J8M3 183 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 STEAP4Q687X5 459 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 RGS9BPQ6ZS82 235 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 PYROXD1Q8WU10 500 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 IFT81Q8WYA0 676 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 DEFB127Q9H1M4 99 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 DEPPQ9NTK1 212 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 HPF1Q9NWY4 346 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 SLC17A6Q9P2U8 582 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 IKZF3Q9UKT9 509 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 CLDN16Q9Y5I7 305 aa18.4■□□□□ 0.54
VARS-221ENST00000463184 HCFC1P51610 2035 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 A0A088AWK7 358 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 ACOT7O00154 380 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 HOXD4P09016 255 aaPredicted RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 RHOXF2BP0C7M4 288 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 ZNF10P21506 573 aaPredicted RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 SAT1P21673 171 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 HNMTP50135 292 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 RAB38P57729 211 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 PPIAP62937 165 aaKnown RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 PMPCAQ10713 525 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 SLC13A2Q13183 592 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 FRG1Q14331 258 aaKnown RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 FASTKD3Q14CZ7 662 aaKnown RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 CES4AQ5XG92 561 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 IFT20Q8IY31 132 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 ASB15Q8WXK1 588 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 SEC16BQ96JE7 1060 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 RHOXF2Q9BQY4 288 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 ZNF559Q9BR84 538 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 PLAC1Q9HBJ0 212 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 SLC24A3Q9HC58 644 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 ADAP2Q9NPF8 381 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 MTRF1LQ9UGC7 380 aaKnown RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 KCNN3Q9UGI6 736 aa18.39■□□□□ 0.53
VARS-221ENST00000463184 MRPS33Q9Y291 106 aaKnown RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 SETD2Q9BYW2 2564 aaPredicted RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 INTS1Q8N201 2190 aaKnown RBP18.39■□□□□ 0.53
VARS-221ENST00000463184 LRIT2A6NDA9 550 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 TMEM200CA6NKL6 621 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 ERI3O43414 337 aaKnown RBP18.38■□□□□ 0.53
VARS-221ENST00000463184 PRKNO60260 465 aaPredicted RBP18.38■□□□□ 0.53
VARS-221ENST00000463184 OR2J2O76002 312 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 C1GALT1C1LP0DN25 315 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 ZNF37AP17032 561 aaPredicted RBP18.38■□□□□ 0.53
VARS-221ENST00000463184 GNAZP19086 355 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 GSTM2P28161 218 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 PLGLB1Q02325 96 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 GXYLT1Q4G148 440 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 IL20RBQ6UXL0 311 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 TMIGD1Q6UXZ0 262 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 CCDC25Q86WR0 208 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 CCDC71Q8IV32 467 aaPredicted RBP18.38■□□□□ 0.53
VARS-221ENST00000463184 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.38■□□□□ 0.53
VARS-221ENST00000463184 ZNF595Q8IYB9 648 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 KLHDC8AQ8IYD2 350 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 TMEM132CQ8N3T6 1108 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 RPRMLQ8N4K4 120 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 NKAPQ8N5F7 415 aaKnown RBP18.38■□□□□ 0.53
VARS-221ENST00000463184 MS4A6EQ96DS6 147 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 EGFL8Q99944 293 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 TSPYL1Q9H0U9 437 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 ZDHHC11Q9H8X9 412 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 MYOTQ9UBF9 498 aa18.38■□□□□ 0.53
VARS-221ENST00000463184 OR14I1A6ND48 311 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 NPIPA2E9PIF3 369 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 NPIPA3F8WFD2 350 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 TGFBR3LH3BV60 316 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 CDC7O00311 574 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 B3GALT2O43825 422 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 SLU7O95391 586 aaKnown RBP18.37■□□□□ 0.53
VARS-221ENST00000463184 PPP2R1BP30154 601 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 HPDP32754 393 aaPredicted RBP18.37■□□□□ 0.53
VARS-221ENST00000463184 MAGEA4P43358 317 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 NUP107P57740 925 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 BMPR2Q13873 1038 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 ELAVL1Q15717 326 aaKnown RBP18.37■□□□□ 0.53
VARS-221ENST00000463184 KRTAP21-3Q3LHN1 58 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 XKR6Q5GH73 641 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 TEX35Q5T0J7 233 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 SLCO4C1Q6ZQN7 724 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 SLC22A16Q86VW1 577 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms