RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ADAMTS9Q9P2N4 1935 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 IGKV1-8A0A0C4DH67 115 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 PRAMEF33A0A0G2JMD5 474 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 PRSS51A0A1B0GVH4 220 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 A0A1B0GVT2 93 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ASPDHA6ND91 283 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 LRIT2A6NDA9 550 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 A8MUI8 341 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 EVPLLA8MZ36 301 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 FXYD1O00168 92 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 RNASET2O00584 256 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 PLPP1O14494 284 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 YY2O15391 372 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ZSCAN9O15535 394 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 AKAP10O43572 662 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 SH3BP5O60239 455 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 TBX19O60806 448 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 SH3BGRLO75368 114 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 BCAS2O75934 225 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 LRATO95237 230 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 PSMG1O95456 288 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 F12P00748 615 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 KLK1P06870 262 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 DRD2P14416 443 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 MAGP20916 626 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 CDH3P22223 829 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 SLC6A2P23975 617 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 TACR1P25103 407 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 CAPZBP47756 277 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 RXRGP48443 463 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 RAE1P78406 368 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 KLC1Q07866 573 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 CYP4F3Q08477 520 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 C2orf80Q0P641 193 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 TRIM25Q14258 630 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 ZIC1Q15915 447 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 UGT8Q16880 541 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ADPRMQ3LIE5 342 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ZC3H12BQ5HYM0 836 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 TOR1AIP1Q5JTV8 583 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 PAGE3Q5JUK9 113 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 MANEAQ5SRI9 462 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 LRIF1Q5T3J3 769 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 OR4C11Q6IEV9 310 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 FAM71E1Q6IPT2 247 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ADNP2Q6IQ32 1131 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 NIPAL1Q6NVV3 410 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 OGFOD3Q6PK18 319 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 SLC2A7Q6PXP3 512 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 DBX2Q6ZNG2 339 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ABHD13Q7L211 337 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 C17orf82Q86X59 251 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 ZCCHC7Q8N3Z6 543 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 ARL14Q8N4G2 192 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ARL10Q8N8L6 244 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 GOLM1Q8NBJ4 401 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 LSM14AQ8ND56 463 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 OR2L5Q8NG80 312 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 OR6C4Q8NGE1 309 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 OR2I1PQ8NGU4 316 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 CREB3L4Q8TEY5 395 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 C16orf78Q8WTQ4 265 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 PATE1Q8WXA2 126 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 JPH3Q8WXH2 748 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 GTF2H4Q92759 462 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 TMEM125Q96AQ2 219 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 RSRC1Q96IZ7 334 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 F2RL3Q96RI0 385 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 UBL7Q96S82 380 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 ELF4Q99607 663 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 KCTD14Q9BQ13 255 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 ECSITQ9BQ95 431 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 CCDC3Q9BQI4 270 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 EFHD1Q9BUP0 239 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ZMYND15Q9H091 742 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 SEMA6CQ9H3T2 930 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 RAD21L1Q9H4I0 556 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ALG2Q9H553 416 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 DDX31Q9H8H2 851 aaKnown RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 ATP13A2Q9NQ11 1180 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 ZNF282Q9UDV7 671 aaPredicted RBP8.51□□□□□ -1.05
VPS50-207ENST00000458530 EPHA6Q9UF33 1036 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 SLCO1B1Q9Y6L6 691 aa8.51□□□□□ -1.05
VPS50-207ENST00000458530 KNTC1P50748 2209 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 TLCD2A6NGC4 264 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SAP18O00422 153 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 NME4O00746 187 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ERI3O43414 337 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 NUDT21O43809 227 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 DUX1O43812 170 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 NOBOXO60393 691 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ENTPD5O75356 428 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CER1O95813 267 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CFIP05156 583 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 FURINP09958 794 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ZCCHC18P0CG32 403 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 PLA2G2AP14555 144 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CD1EP15812 388 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 HOXB6P17509 224 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms