RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 PCBP2Q15366 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 PFKFB4Q16877 469 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 RNFT1Q5M7Z0 435 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 C1QL3Q5VWW1 255 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 GRHL2Q6ISB3 625 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 TRIM40Q6P9F5 258 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 RPS19BP1Q86WX3 136 aaKnown RBP12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 LGI4Q8N135 537 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 TMEM151AQ8N4L1 468 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 SLC5A8Q8N695 610 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 ACOT4Q8N9L9 421 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 FRMD6Q96NE9 622 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 PAFAH2Q99487 392 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 UTP23Q9BRU9 249 aaKnown RBP12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 OR51B5Q9H339 312 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 TRIM45Q9H8W5 580 aaPredicted RBP12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 PNO1Q9NRX1 252 aaKnown RBP12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 TEKT2Q9UIF3 430 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 PCDHGB6Q9Y5F9 930 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 SVILO95425 2214 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 TEX15Q9BXT5 2789 aa12.78□□□□□ -0.36
SMARCD2-204ENST00000450364 SPTBN1Q01082 2364 aaKnown RBP12.77□□□□□ -0.36
SMARCD2-204ENST00000450364 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 A0A1B0GTL3 188 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ASPDHA6ND91 283 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 OR7A17O14581 309 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ZNHIT1O43257 154 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 PRKRAO75569 313 aaKnown RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 SP1P08047 785 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 PCNAP12004 261 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 TYK2P29597 1187 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 TRHRP34981 398 aaPredicted RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ALDH18A1P54886 795 aaKnown RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ELOAQ14241 798 aaKnown RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 FAM83EQ2M2I3 478 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 PAGE2BQ5JRK9 111 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 GOLGA7Q7Z5G4 137 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 SIAH3Q8IW03 269 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 CHERPQ8IWX8 916 aaKnown RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ZNF595Q8IYB9 648 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 HUS1BQ8NHY5 278 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 PTPMT1Q8WUK0 201 aaPredicted RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 NCLNQ969V3 563 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ANKRD9Q96BM1 317 aaPredicted RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 C5orf34Q96MH7 638 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 NSUN5Q96P11 429 aaKnown RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 KCNC2Q96PR1 638 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 FMO2Q99518 471 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 VPS11Q9H270 941 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 LIN28AQ9H9Z2 209 aaKnown RBP12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 ZBTB26Q9HCK0 441 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 DMRT3Q9NQL9 472 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.37
SMARCD2-204ENST00000450364 WASHC1A8K0Z3 465 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 PLPP1O14494 284 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 ZNF354AO60765 605 aaPredicted RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 CTNSO60931 367 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 LDB3O75112 727 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 UNC5CO95185 931 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 EPB42P16452 691 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 HIST1H1TP22492 207 aaPredicted RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 PHBP35232 272 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 ID2Q02363 134 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 TERF2Q15554 542 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 DEPDC1Q5TB30 811 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 KHDRBS2Q5VWX1 349 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 RPS27LQ71UM5 84 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 CCDC91Q7Z6B0 441 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 DNAJB8Q8NHS0 232 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 THAP3Q8WTV1 239 aaPredicted RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 SREK1Q8WXA9 508 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 UCN3Q969E3 161 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 RELTQ969Z4 430 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 CDK15Q96Q40 435 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 MTERF1Q99551 399 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 TSPAN10Q9H1Z9 355 aaPredicted RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 EPB41L4BQ9H329 900 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 LYRM4Q9HD34 91 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 LRFN1Q9P244 771 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 MTRF1LQ9UGC7 380 aaKnown RBP12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 RNF11Q9Y3C5 154 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 TSC22D4Q9Y3Q8 395 aa12.76□□□□□ -0.37
SMARCD2-204ENST00000450364 FBN2P35556 2912 aa12.75□□□□□ -0.37
SMARCD2-204ENST00000450364 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
SMARCD2-204ENST00000450364 SYCE1LA8MT33 242 aa12.75□□□□□ -0.37
SMARCD2-204ENST00000450364 H0YIV9 168 aa12.75□□□□□ -0.37
SMARCD2-204ENST00000450364 PPP6CO00743 305 aa12.75□□□□□ -0.37
SMARCD2-204ENST00000450364 FGF17O60258 216 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms