RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 SERPINA7P05543 415 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 MAOAP21397 527 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 COL8A1P27658 744 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 SERPINB1P30740 379 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 DCTP40126 519 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 NEK2P51955 445 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 CDH13P55290 713 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 OR4D2P58180 307 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 RPS13P62277 151 aaKnown RBP23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 WDR93Q6P2C0 686 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 LINC00696Q6ZRV3 163 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 LCA5Q86VQ0 697 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 SIRT6Q8N6T7 355 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 L3MBTL4Q8NA19 623 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 BRIX1Q8TDN6 353 aaKnown RBP23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 MAGEB10Q96LZ2 347 aaPredicted RBP23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 KCNC2Q96PR1 638 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 SORBS1Q9BX66 1292 aaKnown RBP23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 PPCSQ9HAB8 311 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 DMRT3Q9NQL9 472 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 PTGFRNQ9P2B2 879 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 DCDC2Q9UHG0 476 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 ADGRE2Q9UHX3 823 aa23.51■■□□□ 1.35
HTATSF1-203ENST00000448450 H0YIV9 168 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 PPP6CO00743 305 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 UQCRHP07919 91 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 GSTA1P08263 222 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 RPS17P08708 135 aaKnown RBP23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 ITGAMP11215 1152 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 PIK3CBP42338 1070 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 RAB38P57729 211 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 AP5B1Q2VPB7 878 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 BTBD16Q32M84 506 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 TMEM35AQ53FP2 167 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 DEPDC1Q5TB30 811 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 KHDRBS2Q5VWX1 349 aaKnown RBP23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 ZNF793Q6ZN11 406 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 ZADH2Q8N4Q0 377 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 SRFBP1Q8NEF9 429 aaKnown RBP23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 PPP4R1Q8TF05 950 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 ZNF483Q8TF39 744 aaPredicted RBP23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 REPS1Q96D71 796 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 C5orf34Q96MH7 638 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 WDR77Q9BQA1 342 aaPredicted RBP23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 TBCDQ9BTW9 1192 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 PARD6BQ9BYG5 372 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 NECTIN3Q9NQS3 549 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 ASF1BQ9NVP2 202 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 SLC5A6Q9Y289 635 aa23.5■■□□□ 1.35
HTATSF1-203ENST00000448450 ICAM2P13598 275 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 ATP5A1P25705 553 aaKnown RBP23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 LIM2P55344 173 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 PHEXP78562 749 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 TRAF3Q13114 568 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 ELOAQ14241 798 aaKnown RBP23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 PLEKHN1Q494U1 663 aaPredicted RBP23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 PAPD4Q6PIY7 484 aaKnown RBP23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 ISLR2Q6UXK2 745 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 QSOX2Q6ZRP7 698 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 MILR1Q7Z6M3 343 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 CNPY4Q8N129 248 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 FAM47BQ8NA70 645 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 TMEM52Q8NDY8 209 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 PSMF1Q92530 271 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 TM9SF4Q92544 642 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 NTMT1Q9BV86 223 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 ILKAPQ9H0C8 392 aaPredicted RBP23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 PRDM9Q9NQV7 894 aa23.49■■□□□ 1.35
HTATSF1-203ENST00000448450 TEP1Q99973 2627 aaKnown RBP23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 A8MUA0 341 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 CDH16O75309 829 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 SUPT7LO94864 414 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 CBX6O95503 412 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 ATP5F1P24539 256 aaPredicted RBP23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 SSR2P43308 183 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 RAP1GDS1P52306 607 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 HNRNPFP52597 415 aaKnown RBP23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 HERVK_113P63132 956 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 UNC50Q53HI1 259 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 SGO1Q5FBB7 561 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 TTC19Q6DKK2 380 aaPredicted RBP23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 EMBQ6PCB8 327 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 IGFL3Q6UXB1 125 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 SH2D5Q6ZV89 423 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 CISD2Q8N5K1 135 aaKnown RBP23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 ACOT4Q8N9L9 421 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 OR4F6Q8NGB9 312 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 TRPC4APQ8TEL6 797 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 RGMAQ96B86 450 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 CSF3RQ99062 836 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 LPAR4Q99677 370 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 ERVK-6Q9BXR3 956 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 ROGDIQ9GZN7 287 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 PRTFDC1Q9NRG1 225 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 EMCNQ9ULC0 261 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 DAPP1Q9UN19 280 aa23.48■■□□□ 1.35
HTATSF1-203ENST00000448450 A0A1B0GTL3 188 aa23.47■■□□□ 1.35
HTATSF1-203ENST00000448450 ANKUB1A6NFN9 424 aa23.47■■□□□ 1.35
HTATSF1-203ENST00000448450 A8MUI8 341 aa23.47■■□□□ 1.35
HTATSF1-203ENST00000448450 GLRA3O75311 464 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms