RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TAF12Q16514 161 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 GPR33Q49SQ1 333 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 NHLRC3Q5JS37 347 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 GLCCI1Q86VQ1 547 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 PHACTR4Q8IZ21 702 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 LILRB2Q8N423 598 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 OR11H4Q8NGC9 324 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 SCAMP5Q8TAC9 235 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 TMEM163Q8TC26 289 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 PKMYT1Q99640 499 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 TMEM175Q9BSA9 504 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 ATP13A1Q9HD20 1204 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 DDIT4Q9NX09 232 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 RNF186Q9NXI6 227 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 MPP6Q9NZW5 540 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 PRKAR2AP13861 404 aaKnown RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 FAM209BQ5JX69 171 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 UXS1Q8NBZ7 420 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 ST8SIA2Q92186 375 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 PGAP3Q96FM1 320 aaPredicted RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 ASIC4Q96FT7 647 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF419Q96HQ0 510 aaPredicted RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 ERMAPQ96PL5 475 aaPredicted RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 GHITMQ9H3K2 345 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 CSNK1G1Q9HCP0 422 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 CLN6Q9NWW5 311 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 MATN3O15232 486 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 TPST2O60704 377 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 HOXB9P17482 250 aaPredicted RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 CHRNA4P43681 627 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 IDH2P48735 452 aaKnown RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 CDC42P60953 191 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 SPHARQ15513 63 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 IL27RAQ6UWB1 636 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 EIF4E3Q8N5X7 224 aaKnown RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 OR4A15Q8NGL6 344 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 CEP76Q8TAP6 659 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 SMARCD1Q96GM5 515 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 OR52E6Q96RD3 313 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 COLEC11Q9BWP8 271 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 MND1Q9BWT6 205 aa18.4■□□□□ 0.54
HMGA1-205ENST00000447654 ABT1Q9ULW3 272 aaKnown RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 MRPL42Q9Y6G3 142 aaKnown RBP18.4■□□□□ 0.54
HMGA1-205ENST00000447654 ANKRD36A6QL64 1941 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 PRAMEF33A0A0G2JMD5 474 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 M0R233 179 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 PRAMEF10O60809 474 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 MMP20O60882 483 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 H2AFB1P0C5Y9 115 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 H2AFB2P0C5Z0 115 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 APEX1P27695 318 aaKnown RBP18.39■□□□□ 0.53
HMGA1-205ENST00000447654 IQCCQ4KMZ1 466 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 RGS7BPQ6MZT1 257 aaPredicted RBP18.39■□□□□ 0.53
HMGA1-205ENST00000447654 SPNS2Q8IVW8 549 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 OR8D4Q8NGM9 314 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 AARSD1Q9BTE6 412 aaKnown RBP18.39■□□□□ 0.53
HMGA1-205ENST00000447654 CRISPLD1Q9H336 500 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 SCP2D1Q9UJQ7 156 aa18.39■□□□□ 0.53
HMGA1-205ENST00000447654 SIGLEC6O43699 453 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 LZTS3O60299 673 aaPredicted RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 CCNB2O95067 398 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 ETFDHQ16134 617 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 SNAPC1Q16533 368 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 SPANXN4Q5MJ08 99 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 BHLHB9Q6PI77 547 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 ZNF730Q6ZMV8 503 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 HSD17B13Q7Z5P4 300 aaPredicted RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 RTN4RL1Q86UN2 441 aaPredicted RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 OR11H7Q8NGC8 314 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 OR6P1Q8NGX9 317 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 FUBP1Q96AE4 644 aaKnown RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 PITHD1Q9GZP4 211 aaPredicted RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 SLCO1C1Q9NYB5 712 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 GALPQ9UBC7 116 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 ZNF222Q9UK12 451 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 PTCH2Q9Y6C5 1203 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 LOC102723532A0A0G2JNH3 316 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 LOC285095A0A1B0GVY8 99 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 LINC01387J3KSC0 135 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 CASC3O15234 703 aaKnown RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 FGF2P09038 288 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 OGNP20774 298 aaKnown RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 KDELR2P33947 212 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 HSPA7P48741 367 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 MEOX2P50222 304 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 CAMK2DQ13557 499 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 NCF4Q15080 339 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 RFTN2Q52LD8 501 aaPredicted RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 PLA1AQ53H76 456 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 PABPC1L2AQ5JQF8 200 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 C6orf132Q5T0Z8 1188 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 MRNIPQ6NTE8 343 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 USP45Q70EL2 814 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 KRT74Q7RTS7 529 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 TAC4Q86UU9 113 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 LIX1Q8N485 282 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 ATPAF2Q8N5M1 289 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 METTL6Q8TCB7 284 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 NXPE3Q969Y0 559 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 HSH2DQ96JZ2 352 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms