RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 NOSIPQ9Y314 301 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TVP23AA6NH52 213 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 OR6C75A6NL08 312 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 E7EQ34 232 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NPIPA7E9PJI5 369 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 AIPO00170 330 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 GOSR2O14653 212 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SCAMP3O14828 347 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SLC34A2O95436 690 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 GLAP06280 429 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NPIPA8P0DM63 369 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NR2F1P10589 423 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CKBP12277 381 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 G0S2P27469 103 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SHMT1P34896 483 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 MAGEB1P43366 347 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CDH8P55286 799 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 POLR2GP62487 172 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 FPGSQ05932 587 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 AQP6Q13520 282 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF311Q5JNZ3 666 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 PLAG1Q6DJT9 500 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF730Q6ZMV8 503 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TPGS1Q6ZTW0 290 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CLEC10AQ8IUN9 316 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 LAX1Q8IWV1 398 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CAMKVQ8NCB2 501 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 OR2L5Q8NG80 312 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NSMAFQ92636 917 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SFXN2Q96NB2 322 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 P2RY13Q9BPV8 354 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NDC1Q9BTX1 674 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 POTEKPQ9BYX7 375 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TRIM2Q9C040 744 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 OSGEPL1Q9H4B0 414 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ASB7Q9H672 318 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 IPPKQ9H8X2 491 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 GLOD4Q9HC38 313 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 AGO4Q9HCK5 861 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SCUBE2Q9NQ36 999 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TAS2R8Q9NYW2 309 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TRAPPC4Q9Y296 219 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 A0A0B4J203 849 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CLIC1O00299 241 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 EIF1AYO14602 144 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 WNT9AO14904 365 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 KIAA0355O15063 1070 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SLC16A6O15403 523 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 GTF2F2P13984 249 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 DARSP14868 501 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SPNP16150 400 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CYP2B6P20813 491 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CALCRP30988 508 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SSTR4P31391 388 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 RPL9P32969 192 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 EIF1AXP47813 144 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 KIAA1024LP59773 190 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 VAMP2P63027 116 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NOGQ13253 232 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 GTF2H2Q13888 395 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 PUM1Q14671 1186 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CPSF6Q16630 551 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TCEAL5Q5H9L2 206 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF678Q5SXM1 525 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 H3F3CQ6NXT2 135 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 GTF2H2CQ6P1K8 395 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 FIP1L1Q6UN15 594 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ENPP6Q6UWR7 440 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 DAW1Q8N136 415 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CPA6Q8N4T0 437 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 OR10H4Q8NGA5 316 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SNX33Q8WV41 574 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 DDX1Q92499 740 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 PTP4A1Q93096 173 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ISL2Q96A47 359 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TMEM175Q9BSA9 504 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SLC23A1Q9UHI7 598 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 AFDNP55196 1824 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 RIIAD1A6NNX1 92 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF705FA8MVS1 300 aaPredicted RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 G3V2L1 256 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SLC7A4O43246 635 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CYTIPO60759 359 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 CAPNS1P04632 268 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SNRNP70P08621 437 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF705DP0CH99 300 aaPredicted RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF705BP0CI00 300 aaPredicted RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 HOXD8P13378 290 aaPredicted RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 RHCEP18577 417 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 RBMS1P29558 406 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 DLSTP36957 453 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SOX10P56693 466 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 SLC25A11Q02978 314 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 PAN2Q504Q3 1202 aaKnown RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 NBPF12Q5TAG4 269 aaPredicted RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 LETMD1Q6P1Q0 360 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 ARL9Q6T311 187 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 TMED4Q7Z7H5 227 aa4.96□□□□□ -1.62
SCN11A-202ENST00000444237 LRRC28Q86X40 367 aaPredicted RBP4.96□□□□□ -1.62
SCN11A-202ENST00000444237 PCSK9Q8NBP7 692 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms