RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TEFMQ96QE5 360 aaKnown RBP12.53□□□□□ -0.4
CPSF4-206ENST00000441580 GPR174Q9BXC1 333 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 CHRDQ9H2X0 955 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 NTN4Q9HB63 628 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 LTB4R2Q9NPC1 389 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 IL1RAPQ9NPH3 570 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 GIMAP4Q9NUV9 329 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 DNAAF2Q9NVR5 837 aaKnown RBP12.53□□□□□ -0.4
CPSF4-206ENST00000441580 TEX10Q9NXF1 929 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-206ENST00000441580 ACTR10Q9NZ32 417 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 ACSL6Q9UKU0 697 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 CA14Q9ULX7 337 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 ENTPD4Q9Y227 616 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 ZNF451Q9Y4E5 1061 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 ORC6Q9Y5N6 252 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 HEATR5BQ9P2D3 2071 aa12.53□□□□□ -0.4
CPSF4-206ENST00000441580 IGHV1OR15-9A0A0B4J2B8 117 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 DPPA5A6NC42 116 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 URADA6NGE7 173 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 C2orf74A8MZ97 194 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 BTN3A3O00478 584 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 DLGAP1O14490 977 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 TNFSF14O43557 240 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 NTRK1P04629 796 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 ALPLP05186 524 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 SMIM18P0DKX4 95 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 UGT2B7P16662 529 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PRIM2P49643 509 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 ARHGDIAP52565 204 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PLA2G16P53816 162 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PCBP4P57723 403 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 HYAL2Q12891 473 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 EIF2B5Q13144 721 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 APOFQ13790 326 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 GPR18Q14330 331 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 SPDYE7PQ495Y7 208 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 NDUFAF5Q5TEU4 345 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 OR2T5Q6IEZ7 315 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 SPESP1Q6UW49 350 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 TMEM64Q6YI46 380 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF793Q6ZN11 406 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PIWIL3Q7Z3Z3 882 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 STK32CQ86UX6 486 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 RNF130Q86XS8 419 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PJA1Q8NG27 643 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 OR2T29Q8NH02 315 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 CYGBQ8WWM9 190 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 RSC1A1Q92681 617 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 EXOSC8Q96B26 276 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 MOAP1Q96BY2 351 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 TRIM4Q9C037 500 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 EPS8L2Q9H6S3 715 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PRDM9Q9NQV7 894 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 CPNE7Q9UBL6 633 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 RAPGEFL1Q9UHV5 662 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 C3orf18Q9UK00 162 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 ERVK-11Q9UQG0 969 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.41
CPSF4-206ENST00000441580 LAMA2P24043 3122 aaKnown RBP12.52□□□□□ -0.41
CPSF4-206ENST00000441580 PRAMEF33A0A0G2JMD5 474 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 GSAPA4D1B5 854 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 VILLO15195 856 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 PDE9AO76083 593 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 ETFAP13804 333 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 CTSEP14091 401 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 FPR1P21462 350 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 ATP5A1P25705 553 aaKnown RBP12.51□□□□□ -0.41
CPSF4-206ENST00000441580 RAD23AP54725 363 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 PPP2R2BQ00005 443 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 CDK6Q00534 326 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 TFF2Q03403 129 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 FZD2Q14332 565 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 GK3PQ14409 553 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 CYBRD1Q53TN4 286 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 OTUD3Q5T2D3 398 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-206ENST00000441580 BHLHB9Q6PI77 547 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 IQCHQ86VS3 1027 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 OOSP2Q86WS3 158 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 MMP21Q8N119 569 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 METTL25Q8N6Q8 603 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF655Q8N720 491 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-206ENST00000441580 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-206ENST00000441580 NRBF2Q96F24 287 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 NELL2Q99435 816 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 DOHHQ9BU89 302 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 EPB41L1Q9H4G0 881 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 CXorf36Q9H7Y0 433 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms