RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 C11orf96Q7Z7L8 435 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 NDNFQ8TB73 568 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 SNRNP27Q8WVK2 155 aaKnown RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 RASSF5Q8WWW0 418 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 SMPDL3AQ92484 453 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 SMG7Q92540 1137 aaKnown RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 TFGQ92734 400 aaPredicted RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 ZHX1-C8orf76Q96EF9 292 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 NEURL3Q96EH8 262 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 PDXPQ96GD0 296 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 LRRC3BQ96PB8 259 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 MS4A8Q9BY19 250 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TMEM245Q9H330 911 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 NEUROD4Q9HD90 331 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 IMPAD1Q9NX62 359 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TAAR2Q9P1P5 351 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 AASSQ9UDR5 926 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 ADAM29Q9UKF5 820 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 ACSL6Q9UKU0 697 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 RAB23Q9ULC3 237 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TDRKHQ9Y2W6 561 aaKnown RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 ZNF451Q9Y4E5 1061 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 CORINQ9Y5Q5 1042 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 A3GALT2U3KPV4 340 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TMEM247A6NEH6 219 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 EFCAB10A6NFE3 127 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 EFCAB9A8MZ26 197 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 GPR89AB7ZAQ6 455 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 C5orf67F2Z3F1 127 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 KMOO15229 486 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 MAN1A2O60476 641 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 OXSR1O95747 527 aaPredicted RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 TFPTP0C1Z6 253 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 GPR89BP0CG08 455 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 CBLP22681 906 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 TEAD1P28347 426 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 CTSKP43235 329 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 MAGEA8P43361 318 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 ALDH9A1P49189 494 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 CLK1P49759 484 aaKnown RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 BCAP31P51572 246 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 METAP1P53582 386 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 SMIM11AP58511 58 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 OLR1P78380 273 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 FPGSQ05932 587 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD44-210ENST00000434472 DGCR6Q14129 220 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 TRIM16LQ309B1 348 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 ZNF697Q5TEC3 545 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 EGFLAMQ63HQ2 1017 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 DUS1LQ6P1R4 473 aaKnown RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 PNCKQ6P2M8 343 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 PSRC1Q6PGN9 363 aaPredicted RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 FAM83HQ6ZRV2 1179 aaPredicted RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 USP43Q70EL4 1123 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 SLC44A2Q8IWA5 706 aaPredicted RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 TAGAPQ8N103 731 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 STX19Q8N4C7 294 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 ZNF740Q8NDX6 193 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 OR5AR1Q8NGP9 310 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 OR5AK3PQ8NH89 298 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 OR5K2Q8NHB8 316 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 GGHQ92820 318 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 UBE2FQ969M7 185 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 RGMAQ96B86 450 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 TM4SF18Q96CE8 201 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 IL17FQ96PD4 163 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 MROQ9BYG7 248 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 CXorf36Q9H7Y0 433 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 ACER3Q9NUN7 267 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 ZSCAN32Q9NX65 697 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 OBP2AQ9NY56 170 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 ZNF226Q9NYT6 803 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 CNOT2Q9NZN8 540 aaKnown RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 TMCC3Q9ULS5 477 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 NUP210Q8TEM1 1887 aaPredicted RBP9.94□□□□□ -0.82
CD44-210ENST00000434472 NOTCH4Q99466 2003 aa9.94□□□□□ -0.82
CD44-210ENST00000434472 HTTP42858 3142 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PRAMEF33A0A0G2JMD5 474 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 FUOMA2VDF0 154 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 HEPACAM2A8MVW5 462 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PLPP1O14494 284 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 AIREO43918 545 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SH3BP5O60239 455 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PRAMEF10O60809 474 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 CNOT3O75175 753 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 LCKP06239 509 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 GABRB1P18505 474 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 TNFRSF1BP20333 461 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 IDUAP35475 653 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 BSGP35613 385 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 P2RY2P41231 377 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 VIPR2P41587 438 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 OR1E2P47887 323 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 MANFP55145 182 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 LSM3P62310 102 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 ATP1A4Q13733 1029 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 MLC1Q15049 377 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms