RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 HIST2H2AA3Q6FI13 130 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.23■□□□□ 0.35
NUP50-207ENST00000424634 CLNKQ7Z7G1 428 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 ZNF595Q8IYB9 648 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 LAS2Q8IYD9 372 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 RNF175Q8N4F7 328 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 THAP3Q8WTV1 239 aaPredicted RBP17.23■□□□□ 0.35
NUP50-207ENST00000424634 FRMD6Q96NE9 622 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 GPR78Q96P69 363 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 TSPAN10Q9H1Z9 355 aaPredicted RBP17.23■□□□□ 0.35
NUP50-207ENST00000424634 SNX15Q9NRS6 342 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 NINJ2Q9NZG7 142 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 OPTCQ9UBM4 332 aa17.23■□□□□ 0.35
NUP50-207ENST00000424634 DMGDHQ9UI17 866 aaKnown RBP17.23■□□□□ 0.35
NUP50-207ENST00000424634 A0A087X1B8 175 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 TRBV11-1A0A0K0K1C0 115 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 LRRC14BA6NHZ5 514 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 RTCAO00442 366 aaKnown RBP17.22■□□□□ 0.35
NUP50-207ENST00000424634 CDK2AP1O14519 115 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 PRKNO60260 465 aaPredicted RBP17.22■□□□□ 0.35
NUP50-207ENST00000424634 CTNSO60931 367 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 TGFB1P01137 390 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 HPDP32754 393 aaPredicted RBP17.22■□□□□ 0.35
NUP50-207ENST00000424634 CYB561P49447 251 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 CLCN2P51788 898 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 TERF2Q15554 542 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 MAPKAPK3Q16644 382 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 RNFT1Q5M7Z0 435 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 SIAH3Q8IW03 269 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 HORMAD2Q8N7B1 307 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 TMEM178AQ8NBL3 297 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 NOA1Q8NC60 698 aaKnown RBP17.22■□□□□ 0.35
NUP50-207ENST00000424634 OR7G3Q8NG95 312 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 RHEBL1Q8TAI7 183 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 NCLNQ969V3 563 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 KCNC2Q96PR1 638 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 MAPKAP1Q9BPZ7 522 aa17.22■□□□□ 0.35
NUP50-207ENST00000424634 TRGV8A0A0C4DH27 118 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 TMEM200CA6NKL6 621 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 NME2P1O60361 137 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 SLC25A12O75746 678 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 ALDOAP04075 364 aaKnown RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 PCNAP12004 261 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 NME2P22392 152 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 ATP5A1P25705 553 aaKnown RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 HLCSP50747 726 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 ALDH6A1Q02252 535 aaKnown RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 UAP1Q16222 522 aaPredicted RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 WHAMMP3Q1A5X7 153 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 MED27Q6P2C8 311 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 C16orf47Q6ZP98 133 aaPredicted RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 MMGT1Q8N4V1 131 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 TEX9Q8N6V9 391 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 ACOT4Q8N9L9 421 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 ADAMTS18Q8TE60 1221 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 GPR137Q96N19 417 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 TBCDQ9BTW9 1192 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 ACSS3Q9H6R3 686 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 COPS7BQ9H9Q2 264 aaPredicted RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 LYRM4Q9HD34 91 aa17.21■□□□□ 0.35
NUP50-207ENST00000424634 MRPS33Q9Y291 106 aaKnown RBP17.21■□□□□ 0.35
NUP50-207ENST00000424634 A0A096LPK6 155 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 NPIPA5E9PKD4 350 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 SAP18O00422 153 aaKnown RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 ZNHIT1O43257 154 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 KLK8O60259 260 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 KLHL2O95198 593 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 EPB42P16452 691 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 CA7P43166 264 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 TGM3Q08188 693 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 NAA30Q147X3 362 aaPredicted RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 ACAP2Q15057 778 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 PFKFB4Q16877 469 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 FAM83EQ2M2I3 478 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 GRHL2Q6ISB3 625 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 CCDC91Q7Z6B0 441 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 RELL1Q8IUW5 271 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 PLD6Q8N2A8 252 aaKnown RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 CPSF7Q8N684 471 aaKnown RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 PTPMT1Q8WUK0 201 aaPredicted RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 UBE2E3Q969T4 207 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 VMP1Q96GC9 406 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 SORBS1Q9BX66 1292 aaKnown RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 FUT8Q9BYC5 575 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 ALOXE3Q9BYJ1 711 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 LIN28AQ9H9Z2 209 aaKnown RBP17.2■□□□□ 0.34
NUP50-207ENST00000424634 ADAP2Q9NPF8 381 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 VTI1BQ9UEU0 232 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 FBXW2Q9UKT8 454 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 NPIPA1Q9UND3 350 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 ZNF835Q9Y2P0 537 aa17.2■□□□□ 0.34
NUP50-207ENST00000424634 LRBAP50851 2863 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 EML6Q6ZMW3 1958 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 SYCE1LA8MT33 242 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 CCL21O00585 134 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 FCHO1O14526 889 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 SLC19A2O60779 497 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 LDB3O75112 727 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms