RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ZNF480Q8WV37 535 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CHFRQ96EP1 664 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 Q96MT0 163 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 LRRC3BQ96PB8 259 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 RC3H2Q9HBD1 1191 aaKnown RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 RLIMQ9NVW2 624 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 GIN1Q9NXP7 522 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 DNAJC27Q9NZQ0 273 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 DOCK8Q8NF50 2099 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CD9P21926 228 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 VIPR1P32241 457 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 SGCGQ13326 291 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 INAVAQ3KP66 663 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 LRRC70Q7Z2Q7 622 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 HDDC3Q8N4P3 179 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 SLC5A8Q8N695 610 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 NUS1Q96E22 293 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 ALG14Q96F25 216 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 COL21A1Q96P44 957 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 DSN1Q9H410 356 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CLEC4AQ9UMR7 237 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 TMED5Q9Y3A6 229 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 NR2F1P10589 423 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 MAPK8P45983 427 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 HBA1P69905 142 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 GAB1Q13480 694 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 VITQ6UXI7 678 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 COMMD6Q7Z4G1 85 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 CALHM3Q86XJ0 350 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 FAM9CQ8IZT9 166 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR10G2Q8NGC3 310 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 LGR4Q9BXB1 951 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 UNC13CQ8NB66 2214 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 TRBV5-3A0A0A0MS03 114 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 A0A1W2PRB8 838 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 MID1O15344 667 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 SLC35G4P0C7Q5 338 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 TAB1Q15750 504 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 LRIF1Q5T3J3 769 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ZFP41Q8N8Y5 198 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR51E2Q9H255 320 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ABCB9Q9NP78 766 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 CCDC177Q9NQR7 707 aaPredicted RBP12.81□□□□□ -0.36
COL6A2-204ENST00000409416 TMEM45AQ9NWC5 275 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR51B4Q9Y5P0 310 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 PMF1-BGLAPU3KQ54 211 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 GSAPA4D1B5 854 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 PRKNO60260 465 aaPredicted RBP12.81□□□□□ -0.36
COL6A2-204ENST00000409416 C8GP07360 202 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ITGAMP11215 1152 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 CD6P30203 668 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 RCVRNP35243 200 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
COL6A2-204ENST00000409416 IL18R1Q13478 541 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 KDM4DQ6B0I6 523 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ENTHD1Q8IYW4 607 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR8H2Q8N162 312 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR4E2Q8NGC2 313 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR6Q1Q8NGQ2 317 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ASB11Q8WXH4 323 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 OR8D1Q8WZ84 308 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 TBX5Q99593 518 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ITPAQ9BY32 194 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ERVK-11Q9UQG0 969 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 RNF6Q9Y252 685 aa12.81□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF821O75541 412 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 ARHGEF15O94989 841 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CTSAP10619 480 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 GDI1P31150 447 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 HOXA9P31269 272 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 OXA1LQ15070 435 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 NNATQ16517 81 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 RNASE12Q5GAN4 147 aaKnown RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF362Q5T0B9 420 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CEACAM20Q6UY09 585 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 C17orf64Q86WR6 236 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 PTOV1Q86YD1 416 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 RBM45Q8IUH3 476 aaKnown RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CCDC71Q8IV32 467 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CCDC116Q8IYX3 515 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 SLC34A3Q8N130 599 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 LGI4Q8N135 537 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 FAM83FQ8NEG4 500 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 SLC12A9Q9BXP2 914 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 AKIP1Q9NQ31 210 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 A6NL46 340 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CDC123O75794 336 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 NTN1O95631 604 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 IMPA1P29218 277 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 PFN3P60673 137 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 LASP1Q14847 261 aaKnown RBP12.8□□□□□ -0.36
COL6A2-204ENST00000409416 SMARCD3Q6STE5 483 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 EIF3MQ7L2H7 374 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms