RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ZNF793Q6ZN11 406 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 LRRC70Q7Z2Q7 622 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 ZNF473Q8WTR7 871 aaKnown RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 NCLNQ969V3 563 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 C16orf45Q96MC5 204 aaPredicted RBP17.08■□□□□ 0.32
FXN-203ENST00000396366 FRMD6Q96NE9 622 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 MAPKAP1Q9BPZ7 522 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 FBXW2Q9UKT8 454 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 NPIPA1Q9UND3 350 aa17.08■□□□□ 0.32
FXN-203ENST00000396366 ASPDHA6ND91 283 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 K7EPI3 171 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 CCL21O00585 134 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 CLDN4O14493 209 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 SLC25A12O75746 678 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 TGFB1P01137 390 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 TRHRP34981 398 aaPredicted RBP17.07■□□□□ 0.32
FXN-203ENST00000396366 CYB561P49447 251 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 HLCSP50747 726 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 CLCN2P51788 898 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 ALDH6A1Q02252 535 aaKnown RBP17.07■□□□□ 0.32
FXN-203ENST00000396366 CKAP4Q07065 602 aaKnown RBP17.07■□□□□ 0.32
FXN-203ENST00000396366 E2F2Q14209 437 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 PAGE2BQ5JRK9 111 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 ZNF595Q8IYB9 648 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 LAS2Q8IYD9 372 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 CPSF7Q8N684 471 aaKnown RBP17.07■□□□□ 0.32
FXN-203ENST00000396366 TEX9Q8N6V9 391 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 HORMAD2Q8N7B1 307 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 TMEM178AQ8NBL3 297 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 SORBS1Q9BX66 1292 aaKnown RBP17.07■□□□□ 0.32
FXN-203ENST00000396366 MS4A8Q9BY19 250 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 COPS7BQ9H9Q2 264 aaPredicted RBP17.07■□□□□ 0.32
FXN-203ENST00000396366 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 SNX15Q9NRS6 342 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 OPTCQ9UBM4 332 aa17.07■□□□□ 0.32
FXN-203ENST00000396366 A0A088AWK7 358 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 NME2P1O60361 137 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 CTNSO60931 367 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ZNF10P21506 573 aaPredicted RBP17.06■□□□□ 0.32
FXN-203ENST00000396366 NME2P22392 152 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ATP5A1P25705 553 aaKnown RBP17.06■□□□□ 0.32
FXN-203ENST00000396366 CA7P43166 264 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ID2Q02363 134 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 C3AR1Q16581 482 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 MED27Q6P2C8 311 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 SIAH3Q8IW03 269 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ARMC10Q8N2F6 343 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ZNF321PQ8N8H1 164 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ACOT4Q8N9L9 421 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 OR7G3Q8NG95 312 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 UBTD2Q8WUN7 234 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 CCDC120Q96HB5 630 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 GPR137Q96N19 417 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 GPR78Q96P69 363 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 KCNC2Q96PR1 638 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 ALOXE3Q9BYJ1 711 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 OR51B5Q9H339 312 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 TRIM45Q9H8W5 580 aaPredicted RBP17.06■□□□□ 0.32
FXN-203ENST00000396366 DMGDHQ9UI17 866 aaKnown RBP17.06■□□□□ 0.32
FXN-203ENST00000396366 PPIEQ9UNP9 301 aaKnown RBP17.06■□□□□ 0.32
FXN-203ENST00000396366 LRBAP50851 2863 aa17.06■□□□□ 0.32
FXN-203ENST00000396366 A0A087X1B8 175 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 A0A096LPK6 155 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 TMEM200CA6NKL6 621 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 SLC19A2O60779 497 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 LDB3O75112 727 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 ITGA10O75578 1167 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 ALDOAP04075 364 aaKnown RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 IFNA16P05015 189 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 RFC3P40938 356 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 HSF1Q00613 529 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 TGM3Q08188 693 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 DDX39BQ13838 428 aaKnown RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 TERF2Q15554 542 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 PFKFB4Q16877 469 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 PLD6Q8N2A8 252 aaKnown RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 NOA1Q8NC60 698 aaKnown RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 PTPMT1Q8WUK0 201 aaPredicted RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 ITLN2Q8WWU7 325 aaPredicted RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 ZNF592Q92610 1267 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 VMP1Q96GC9 406 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 TINAGQ9UJW2 476 aa17.05■□□□□ 0.32
FXN-203ENST00000396366 MRPS33Q9Y291 106 aaKnown RBP17.05■□□□□ 0.32
FXN-203ENST00000396366 FCHO1O14526 889 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 EPB42P16452 691 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
FXN-203ENST00000396366 RBPJQ06330 500 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 PCDH1Q08174 1060 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 SETDB1Q15047 1291 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 FAM83EQ2M2I3 478 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 SP5Q6BEB4 398 aaPredicted RBP17.04■□□□□ 0.32
FXN-203ENST00000396366 GRHL2Q6ISB3 625 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 MDGA2Q7Z553 956 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 MYLK4Q86YV6 388 aaPredicted RBP17.04■□□□□ 0.32
FXN-203ENST00000396366 SULF2Q8IWU5 870 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 OR4N5Q8IXE1 308 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 RHEBL1Q8TAI7 183 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 ADAMTS18Q8TE60 1221 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 UBE2E3Q969T4 207 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms