RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 C11orf24Q96F05 449 aaPredicted RBP6.63□□□□□ -1.35
RTN4-205ENST00000394609 OR52E6Q96RD3 313 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 HOPXQ9BPY8 73 aaPredicted RBP6.63□□□□□ -1.35
RTN4-205ENST00000394609 BCL7BQ9BQE9 202 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 AIF1LQ9BQI0 150 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 SORBS1Q9BX66 1292 aaKnown RBP6.63□□□□□ -1.35
RTN4-205ENST00000394609 PCBD2Q9H0N5 130 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 CLMPQ9H6B4 373 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 KIR3DX1Q9H7L2 352 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 COPS7BQ9H9Q2 264 aaPredicted RBP6.63□□□□□ -1.35
RTN4-205ENST00000394609 WASH6PQ9NQA3 447 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 TMEM45AQ9NWC5 275 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 TAAR2Q9P1P5 351 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 CD300AQ9UGN4 299 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 RUVBL1Q9Y265 456 aaKnown RBP6.63□□□□□ -1.35
RTN4-205ENST00000394609 ERGIC3Q9Y282 383 aa6.63□□□□□ -1.35
RTN4-205ENST00000394609 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 C7orf72A4D263 438 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 ANKDD1BA6NHY2 528 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 ISM1B1AKI9 464 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 MAGEB3O15480 346 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 DFNA5O60443 496 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CNOT3O75175 753 aaKnown RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 MYO1DO94832 1006 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 DKK1O94907 266 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 WNT1P04628 370 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 IL6P05231 212 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 SERPIND1P05546 499 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 GSNP06396 782 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 KLK1P06870 262 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 HSD3B1P14060 373 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 EFNA1P20827 205 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 HSD3B2P26439 372 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CD27P26842 260 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PEBP1P30086 187 aaKnown RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 S100A3P33764 101 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PIK3CBP42338 1070 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 RAC1P63000 192 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CSNK1G2P78368 415 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 COL9A2Q14055 689 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 GPR18Q14330 331 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PLCL1Q15111 1095 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 MAPKAPK3Q16644 382 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 HKDC1Q2TB90 917 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 SAMD4BQ5PRF9 694 aaKnown RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 NANOGP8Q6NSW7 305 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 TSSK4Q6SA08 328 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CYP2R1Q6VVX0 501 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 COMMD6Q7Z4G1 85 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 ZNF761Q86XN6 746 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 TRIM48Q8IWZ4 208 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 RIMKLAQ8IXN7 391 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 UBALD2Q8IYN6 164 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CENPSQ8N2Z9 138 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 OR7A2PQ8NGA2 310 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 GPBAR1Q8TDU6 330 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 GTF2H4Q92759 462 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 UBE2E3Q969T4 207 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 ZUFSPQ96AP4 578 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 HSPA12BQ96MM6 686 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 F2RL3Q96RI0 385 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 MACROD1Q9BQ69 325 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 INPP5KQ9BT40 448 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 RAB11FIP5Q9BXF6 653 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 SRMSQ9H3Y6 488 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 RPF2Q9H7B2 306 aaKnown RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 NANOGQ9H9S0 305 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 GPN2Q9H9Y4 310 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 SLC6A13Q9NSD5 602 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 SELENONQ9NZV5 590 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PCDHA9Q9Y5H5 950 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 RTCAO00442 366 aaKnown RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 BTN3A3O00478 584 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 TOR1BO14657 336 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PRICKLE3O43900 615 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 PCDH7O60245 1069 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 NOL3O60936 208 aaKnown RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 TBX6O95947 436 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 PDGFBP01127 241 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 NTRK1P04629 796 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CHRM5P08912 532 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 COX7A2P14406 83 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PRPS1L1P21108 318 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 BCKDHBP21953 392 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CXCR2P25025 360 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 PTX3P26022 381 aaPredicted RBP6.62□□□□□ -1.35
RTN4-205ENST00000394609 NDUFS1P28331 727 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 TIA1P31483 386 aaKnown RBP eCLIP6.62□□□□□ -1.354e-8■■■□□ 16.3
RTN4-205ENST00000394609 GRIA3P42263 894 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 STT3AP46977 705 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 MTPNP58546 118 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 LIPEQ05469 1076 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 SELPLGQ14242 412 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 GTDC1Q4AE62 458 aa6.62□□□□□ -1.35
RTN4-205ENST00000394609 CRTC2Q53ET0 693 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms