RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ALOXE3Q9BYJ1 711 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 RHBGQ9H310 441 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 MOV10Q9HCE1 1003 aaKnown RBP15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SPATA7Q9P0W8 599 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 PCDHGA6Q9Y5G7 932 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM202A6NGA9 273 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 ADORA3P0DMS8 318 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 HMGA1P17096 107 aaKnown RBP15.46■□□□□ 0.07
PCDH1-203ENST00000394536 LHCGRP22888 699 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 NTSP30990 170 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 BCL7AQ4VC05 210 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 PRSS36Q5K4E3 855 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 DDI2Q5TDH0 399 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SHFQ7M4L6 423 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 LYSMD2Q8IV50 215 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 WDR48Q8TAF3 677 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SLC9A6Q92581 669 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 TBX5Q99593 518 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 PAQR5Q9NXK6 330 aaPredicted RBP15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SOBPA7XYQ1 873 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 HNRNPCL2B2RXH8 293 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 PDPK1O15530 556 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 C1QTNF12Q5T7M4 302 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 BCDIN3DQ7Z5W3 292 aaKnown RBP15.46■□□□□ 0.06
PCDH1-203ENST00000394536 GHDCQ8N2G8 530 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF740Q8NDX6 193 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 AIF1LQ9BQI0 150 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 TMEM246Q9BRR3 403 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 TSSK6Q9BXA6 273 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 MMP28Q9H239 520 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 NMNAT1Q9HAN9 279 aaPredicted RBP15.46■□□□□ 0.06
PCDH1-203ENST00000394536 KCNK12Q9HB15 430 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 AKIP1Q9NQ31 210 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 SERHLQ9NQF3 203 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 FBXW2Q9UKT8 454 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 NDRG4Q9ULP0 352 aaKnown RBP15.46■□□□□ 0.06
PCDH1-203ENST00000394536 ENTPD4Q9Y227 616 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 CLCA3PQ9Y6N3 262 aa15.46■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF638Q14966 1978 aaKnown RBP15.45■□□□□ 0.06
PCDH1-203ENST00000394536 TTC34A8MYJ7 566 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 CPNE3O75131 537 aaKnown RBP15.45■□□□□ 0.06
PCDH1-203ENST00000394536 GPX2P18283 190 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 NOS3P29474 1203 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 VIPR1P32241 457 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 DGKGP49619 791 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 GAB1Q13480 694 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 LRIF1Q5T3J3 769 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 SMARCD3Q6STE5 483 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 C16orf62Q7Z3J2 963 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 TADA1Q96BN2 335 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 VMP1Q96GC9 406 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 QRFPRQ96P65 431 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 F2RL3Q96RI0 385 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 ZSCAN5AQ9BUG6 496 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 SNX7Q9UNH6 387 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 OR2A25A4D2G3 310 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 H7BY64 318 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 PI15O43692 258 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 COQ9O75208 318 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 ENTPD6O75354 484 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 F11P03951 625 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 SLC10A3P09131 477 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 C8orf89P0DMQ9 161 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 ANXA11P50995 505 aaKnown RBP15.45■□□□□ 0.06
PCDH1-203ENST00000394536 PIN1Q13526 163 aaPredicted RBP15.45■□□□□ 0.06
PCDH1-203ENST00000394536 GINS1Q14691 196 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 ZSWIM7Q19AV6 140 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 PLPP4Q5VZY2 271 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 MZT2BQ6NZ67 158 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 PNCKQ6P2M8 343 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 OVCA2Q8WZ82 227 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 GLYATL1Q969I3 302 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 FKBP10Q96AY3 582 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 RAD51AP1Q96B01 352 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 PRAP1Q96NZ9 151 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 LINC00597Q9H2U6 94 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF334Q9HCZ1 680 aaPredicted RBP15.45■□□□□ 0.06
PCDH1-203ENST00000394536 NDUFAF4Q9P032 175 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 PSORS1C1Q9UIG5 152 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 CENPFP49454 3210 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 AREL1O15033 823 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 TEX28O15482 410 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 HLA-FP30511 346 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 ATAT1Q5SQI0 421 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 SLC8B1Q6J4K2 584 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 SYCE2Q6PIF2 218 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 NRARPQ7Z6K4 114 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 LHFPL3Q86UP9 236 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 KREMEN2Q8NCW0 462 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 HRASLS5Q96KN8 279 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 TMED9Q9BVK6 235 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 SMURF1Q9HCE7 757 aa15.45■□□□□ 0.06
PCDH1-203ENST00000394536 CLDN24A6NM45 220 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 NUAK1O60285 661 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 MMP20O60882 483 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 SOD2P04179 222 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 IFI30P13284 250 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 SLC19A1P41440 591 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 SP140Q13342 867 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 PRAMEF14Q5SWL7 426 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms