RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LPCAT1Q8NF37 534 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TBCDQ9BTW9 1192 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 PIF1Q9H611 641 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 POPDC3Q9HBV1 291 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 UBQLN2Q9UHD9 624 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 C3orf18Q9UK00 162 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TMEM238LA0A1B0GVL6 79 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 NDUFS3O75489 264 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TSPAN12O95859 305 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TPOP07202 933 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 SMIM6P0DI80 62 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 ASMTP46597 345 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 MASP1P48740 699 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 HYAL2Q12891 473 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 MAB21L1Q13394 359 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 IL18R1Q13478 541 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 CHMP1BQ7LBR1 199 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 OVCH2Q7RTZ1 564 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 CCDC190Q86UF4 302 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 ZNF527Q8NB42 609 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 ITFG1Q8TB96 612 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TSPEARQ8WU66 669 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 NSMAFQ92636 917 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TUBGCP3Q96CW5 907 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 CAPNS2Q96L46 248 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 CYP2S1Q96SQ9 504 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 REG4Q9BYZ8 158 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 DUSP21Q9H596 190 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 SLC22A11Q9NSA0 550 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 TPRKBQ9Y3C4 175 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 DNAJC15Q9Y5T4 150 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 SESN1Q9Y6P5 492 aa14.89□□□□□ -0.03
FXN-201ENST00000377270 FAM74A7A6NL05 159 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PRKRAO75569 313 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 IFNA7P01567 189 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 MTHFD2P13995 350 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PRF1P14222 555 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 HMGA1P17096 107 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 CR2P20023 1033 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 ETV6P41212 452 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 CDKN1CP49918 316 aaPredicted RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 CLCN7P51798 805 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PGDP52209 483 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 SLC35A2P78381 396 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 IL5RAQ01344 420 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 TAF1AQ15573 450 aaPredicted RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 FAM74A3Q4VXF1 159 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 ARMCX4Q5H9R4 360 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 RNF219Q5W0B1 726 aaPredicted RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 SLC27A4Q6P1M0 643 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 ZZZ3Q8IYH5 903 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 HS3ST5Q8IZT8 346 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 RBFAQ8N0V3 343 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 CARFQ8N187 725 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 STPG2Q8N412 459 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 SVOPLQ8N434 492 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 RHEBL1Q8TAI7 183 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 SETD7Q8WTS6 366 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 ADAMTS14Q8WXS8 1223 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 AP2M1Q96CW1 435 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 WDR77Q9BQA1 342 aaPredicted RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 PTDSS2Q9BVG9 487 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 SLC22A4Q9H015 551 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 BTBD1Q9H0C5 482 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 MID1IP1Q9NPA3 183 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 TAS2R13Q9NYV9 303 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 FNDC3AQ9Y2H6 1198 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 AKAP8O43823 692 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 PQBP1O60828 265 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 JUNDP17535 347 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 TGFBR2P37173 567 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 CCL23P55773 120 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 CSTF1Q05048 431 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 RPA4Q13156 261 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 NCF4Q15080 339 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 RFX4Q33E94 735 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PAGE3Q5JUK9 113 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 ANKRD34AQ69YU3 496 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 AFTPHQ6ULP2 937 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 SYVN1Q86TM6 617 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PHYKPLQ8IUZ5 450 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 IL17RCQ8NAC3 791 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 NLGN4YQ8NFZ3 816 aaPredicted RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 WBP2Q969T9 261 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 KIAA1191Q96A73 305 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PLD4Q96BZ4 506 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 NSUN5Q96P11 429 aaKnown RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 ATOH8Q96SQ7 321 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 HTATIP2Q9BUP3 242 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 MND1Q9BWT6 205 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 ASH2LQ9UBL3 628 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 DNAJB9Q9UBS3 223 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 GPN3Q9UHW5 284 aaPredicted RBP14.88□□□□□ -0.03
FXN-201ENST00000377270 RAI2Q9Y5P3 530 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 PTGDR2Q9Y5Y4 395 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 CHD5Q8TDI0 1954 aa14.88□□□□□ -0.03
FXN-201ENST00000377270 ASPDHA6ND91 283 aa14.87□□□□□ -0.03
FXN-201ENST00000377270 KRBOX1C9JBD0 128 aa14.87□□□□□ -0.03
FXN-201ENST00000377270 TO15178 435 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms