RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PLRG1O43660 514 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 SOCS5O75159 536 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 RHOBTB1O94844 696 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 POP4O95707 220 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 JCHAINP01591 159 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 APOC2P02655 101 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 IGHV4-34P06331 123 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 CHRM4P08173 479 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SNRNP70P08621 437 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 ADRB3P13945 408 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 CCNB1P14635 433 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 PRLRP16471 622 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 CCNCP24863 283 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 OXTRP30559 389 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 MAT2AP31153 395 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 TTKP33981 857 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 ATP5OP48047 213 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 TAS2R38P59533 333 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 AP1S1P61966 158 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 OTUD4Q01804 1114 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 RAD51Q06609 339 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 ZNF33AQ06730 810 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 PPIDQ08752 370 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 RFTN1Q14699 578 aaPredicted RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 PDK1Q15118 436 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SF3A2Q15428 464 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 MYLK3Q32MK0 819 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 KRTAP24-1Q3LI83 254 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 ZNF805Q5CZA5 627 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 CFAP58Q5T655 872 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 MARC1Q5VT66 337 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 IL20RBQ6UXL0 311 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 GDPD4Q6W3E5 623 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 ERN2Q76MJ5 926 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 VSIG1Q86XK7 387 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SLC35F6Q8N357 371 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 BBS5Q8N3I7 341 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 RNF10Q8N5U6 811 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 OR2T34Q8NGX1 318 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 LILRB1Q8NHL6 650 aaPredicted RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 ACTL9Q8TC94 416 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 PDCD6IPQ8WUM4 868 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 TMEM170AQ8WVE7 144 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 P3H4Q92791 437 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 BIRC7Q96CA5 298 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 HES6Q96HZ4 224 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 PPP1R16AQ96I34 528 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 ZNF599Q96NL3 588 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 AGAP3Q96P47 875 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 QKIQ96PU8 341 aaKnown RBP eCLIP4.28□□□□□ -1.72
PMS1-202ENST00000374826 PSKH2Q96QS6 385 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 NUDCD1Q96RS6 583 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SEMA3CQ99985 751 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 MGME1Q9BQP7 344 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 WRAP53Q9BUR4 548 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 STN1Q9H668 368 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 ATP13A3Q9H7F0 1226 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SGK2Q9HBY8 427 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SPATS2LQ9NUQ6 558 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 RBM22Q9NW64 420 aaKnown RBP eCLIP4.28□□□□□ -1.72
PMS1-202ENST00000374826 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 KCNG2Q9UJ96 466 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 SCML1Q9UN30 329 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 CA5BQ9Y2D0 317 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 R3HDM2Q9Y2K5 976 aaKnown RBP4.28□□□□□ -1.72
PMS1-202ENST00000374826 ACACAQ13085 2346 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 DCHS1Q96JQ0 3298 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 FER1L5A0AVI2 2057 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 A0A0U1RQS6 177 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 TSPAN11A1L157 253 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 BCLAF3A2AJT9 711 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 LRRC72A6NJI9 287 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 A8MX80 341 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 PEX12O00623 359 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SLC31A1O15431 190 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SLC7A4O43246 635 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 ZSCAN12O43309 604 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 CH25HO95992 272 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 CGAP01215 116 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SLC4A1P02730 911 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 ATP1A1P05023 1023 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 RETP07949 1114 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 DHRS4L1P0CG22 281 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 PTPN3P26045 913 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 FMO4P31512 558 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 HSPA9P38646 679 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 MMP12P39900 470 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 CETN2P41208 172 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 CD86P42081 329 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 CSNK1DP48730 415 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 NR2C2P49116 596 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 EIF3EP60228 445 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 IFI35P80217 286 aaPredicted RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 POU3F1Q03052 451 aaPredicted RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 BCL2L1Q07817 233 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 NIPAL4Q0D2K0 466 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms