RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TRBC2A0A5B9 178 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 PDX1P52945 283 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 THAP5Q7Z6K1 395 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 ZZZ3Q8IYH5 903 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 BBS10Q8TAM1 723 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 CHID1Q9BWS9 393 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 GPN2Q9H9Y4 310 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 TOR1BO14657 336 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 AURKAO14965 403 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 PORP16435 677 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 FOLR3P41439 243 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 FOLH1Q04609 750 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 PCDH1Q08174 1060 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 TRIM16LQ309B1 348 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.72■□□□□ 0.111e-7■■■■■ 34.5
SMARCA4-201ENST00000344626 SYCE2Q6PIF2 218 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 IQCHQ86VS3 1027 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 AMER2Q8N7J2 671 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 CLEC1AQ8NC01 280 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 CIB1Q99828 191 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 CLK4Q9HAZ1 481 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 MICAL3Q7RTP6 2002 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 TPD52L2O43399 206 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 UGDHO60701 494 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 AK1P00568 194 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 ACVR2AP27037 513 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 CTSCP53634 463 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 ARMC4Q5T2S8 1044 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 SH3YL1Q96HL8 342 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 POLR2J3Q9H1A7 115 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 OR6C2Q9NZP2 312 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 MYO18AQ92614 2054 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 KPNA4O00629 521 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 H1F0P07305 194 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 TXNL4AP83876 142 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 DLX2Q07687 328 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 PLCXD2Q0VAA5 305 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 RPS27LQ71UM5 84 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 RNASE11Q8TAA1 199 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 HIST1H2AAQ96QV6 131 aa15.72■□□□□ 0.11
SMARCA4-201ENST00000344626 EFCAB7A8K855 629 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 RCBTB2O95199 551 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 SYNGR4O95473 234 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 SLC16A8O95907 504 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 PVRP15151 417 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 RPS6KA3P51812 740 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 ZNF57Q68EA5 555 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 PEG10Q86TG7 708 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 HUS1BQ8NHY5 278 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 AP3S1Q92572 193 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 MRGPRX1Q96LB2 322 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 ZNF570Q96NI8 536 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 IL21Q9HBE4 155 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 ZBTB26Q9HCK0 441 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 LIPT1Q9Y234 373 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 OR5F1O95221 314 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 FGF3P11487 239 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 MAGEA6P43360 314 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 BTBD16Q32M84 506 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 GRHL2Q6ISB3 625 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 REEP3Q6NUK4 255 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 KLHDC8AQ8IYD2 350 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 FBXL6Q8N531 539 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 NT5C3BQ969T7 300 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 GDF15Q99988 308 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 MRPS26Q9BYN8 205 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 PLEKHA1Q9HB21 404 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 POT1Q9NUX5 634 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 MED31Q9Y3C7 131 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 NFS1Q9Y697 457 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 OAS3Q9Y6K5 1087 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 WSCD2Q2TBF2 565 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 IZUMO1Q8IYV9 350 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 SLC22A15Q8IZD6 547 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 OR7A2PQ8NGA2 310 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 NEK7Q8TDX7 302 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 SERINC2Q96SA4 455 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 FAM192AQ9GZU8 254 aa15.71■□□□□ 0.11
SMARCA4-201ENST00000344626 LINC00854A0A1B0GVQ3 168 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 C4BPBP20851 252 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 HK3P52790 923 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 MAPK14Q16539 360 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 FLYWCH1Q4VC44 716 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 UBE2J2Q8N2K1 259 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 WBP2Q969T9 261 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 GPER1Q99527 375 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 MAP3K3Q99759 626 aa15.71■□□□□ 0.1
SMARCA4-201ENST00000344626 NPIPA5E9PKD4 350 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 GPR39O43194 453 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 MTHFD1P11586 935 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 RCVRNP35243 200 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 RORAP35398 523 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 PRLHRP49683 370 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 EMP2P54851 167 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 SERTAD2Q14140 314 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 OR4D1Q15615 310 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 FAM47BQ8NA70 645 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 NUP43Q8NFH3 380 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 FUBP1Q96AE4 644 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 ULBP3Q9BZM4 244 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms