RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 GPR141Q7Z602 305 aa19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 PATL1Q86TB9 770 aaKnown RBP19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 TRIM73Q86UV7 250 aa19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 DCP2Q8IU60 420 aaKnown RBP19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 FBXL20Q96IG2 436 aa19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 QRFPRQ96P65 431 aa19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 TEFMQ96QE5 360 aaKnown RBP19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 LRRC61Q9BV99 259 aa19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 PCDHGA4Q9Y5G9 962 aa19.3■□□□□ 0.68
RIPPLY3-201ENST00000329553 KIR2DS5A0A0G2JLQ3 304 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 A0A0G2JNG1 304 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 KIR2DS3K7RE56 304 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 ZNF701M0R085 212 aaPredicted RBP19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 CLOCKO15516 846 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 GMNNO75496 209 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 LDLRP01130 860 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 GPX2P18283 190 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 RPS9P46781 194 aaKnown RBP19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 KIR2DS5Q14953 304 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 NUDT13Q86X67 352 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 CLEC4FQ8N1N0 589 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 DHRSXQ8N5I4 330 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 TBC1D19Q8N5T2 526 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 MFSD9Q8NBP5 474 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 FAM46DQ8NEK8 389 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 OR4A15Q8NGL6 344 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 OR10G6Q8NH81 332 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 CYGBQ8WWM9 190 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 C17orf62Q9BQA9 187 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 SLC6A16Q9GZN6 736 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 DDX31Q9H8H2 851 aaKnown RBP19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 V9GYQ6 96 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 C1orf226A1L170 272 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 GPR37L1O60883 481 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 ABCB1P08183 1280 aaPredicted RBP19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 UGT2B7P16662 529 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 ESRRGP62508 458 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 HBA1P69905 142 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 ADPRMQ3LIE5 342 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 USP51Q70EK9 711 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 UBALD2Q8IYN6 164 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 CHID1Q9BWS9 393 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 MIR1-1HGQ9H1L0 117 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 PCED1AQ9H1Q7 454 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 LIN28AQ9H9Z2 209 aaKnown RBP19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 TPT1P8Q9HAU6 139 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 MIEF1Q9NQG6 463 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 ACTR10Q9NZ32 417 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 ADAM29Q9UKF5 820 aa19.29■□□□□ 0.68
RIPPLY3-201ENST00000329553 GSAPA4D1B5 854 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 C4orf51C9J302 202 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 CXCR6O00574 342 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 CLIC3O95833 236 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 C6orf47O95873 294 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 GSTM2P28161 218 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 LRRC74AQ0VAA2 488 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 GAB1Q13480 694 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 TMEM35AQ53FP2 167 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 ZNF793Q6ZN11 406 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 GPR155Q7Z3F1 870 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 PNPT1Q8TCS8 783 aaKnown RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 MS4A6EQ96DS6 147 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 REXO5Q96IC2 774 aaKnown RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 FCRL4Q96PJ5 515 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 SEPHS2Q99611 448 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 ABCG4Q9H172 646 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 WBP11Q9Y2W2 641 aaKnown RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 SIT1Q9Y3P8 196 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 ZW10O43264 779 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 DDCP20711 480 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 CXCL12P48061 93 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 EMP3P54852 163 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 RACK1P63244 317 aaKnown RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 FAM180BQ6P0A1 224 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 FBXO42Q6P3S6 717 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 DHRS4L2Q6PKH6 230 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 SERPINA11Q86U17 422 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 DRAXINQ8NBI3 349 aaPredicted RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 GOT1L1Q8NHS2 421 aaPredicted RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 FAM81AQ8TBF8 368 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 ZFP90Q8TF47 636 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 NPLQ9BXD5 320 aaPredicted RBP19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 VPS4AQ9UN37 437 aa19.28■□□□□ 0.68
RIPPLY3-201ENST00000329553 A0A0A6YYD5 115 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 K7ESF4 209 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 TLR4O00206 839 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 SEC24DO94855 1032 aaPredicted RBP19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 SCELO95171 688 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 CSF2P04141 144 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 MAGP20916 626 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 SSR2P43308 183 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 ADARB1P78563 741 aaKnown RBP19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 DCTN2Q13561 401 aaKnown RBP19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 TJAP1Q5JTD0 557 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 PRPF38BQ5VTL8 546 aaKnown RBP19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 ZNF761Q86XN6 746 aaPredicted RBP19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 MAGEE2Q8TD90 523 aaPredicted RBP19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 ZDHHC1Q8WTX9 485 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 ISOC1Q96CN7 298 aa19.27■□□□□ 0.68
RIPPLY3-201ENST00000329553 HSPA12BQ96MM6 686 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms