RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PRTFDC1Q9NRG1 225 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 SLC5A6Q9Y289 635 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 ITPR2Q14571 2701 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 ASPDHA6ND91 283 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 TMEM200CA6NKL6 621 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 SYCE1LA8MT33 242 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 A8MUA0 341 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 DDAH2O95865 285 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 STSP08842 583 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 SBK3P0C264 359 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 EPB42P16452 691 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 TPP2P29144 1249 aaPredicted RBP18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 GTF3C1Q12789 2109 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 OR1C1Q15619 314 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 MED27Q6P2C8 311 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 CEP128Q6ZU80 1094 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 CYP4X1Q8N118 509 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 ACOT4Q8N9L9 421 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 B3GNT7Q8NFL0 401 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 KIF18AQ8NI77 898 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 ADAMTS18Q8TE60 1221 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 KCNC2Q96PR1 638 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 MAPKAP1Q9BPZ7 522 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 SORBS1Q9BX66 1292 aaKnown RBP18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 TSPYL1Q9H0U9 437 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 PLEKHB1Q9UF11 243 aaPredicted RBP18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 ZNF180Q9UJW8 692 aa18.51■□□□□ 0.55
PDZRN3-202ENST00000308537 PRKNO60260 465 aaPredicted RBP18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 SH3BGRLO75368 114 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 RASAL1O95294 804 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 CLDN1O95832 211 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 TGFB1P01137 390 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 UQCRHP07919 91 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 TRHRP34981 398 aaPredicted RBP18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 KCNK10P57789 538 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 DEPDC1Q5TB30 811 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 KHDRBS2Q5VWX1 349 aaKnown RBP18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 HUS1BQ8NHY5 278 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 UBE2E3Q969T4 207 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 UTP23Q9BRU9 249 aaKnown RBP18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 TBCDQ9BTW9 1192 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 TXLNGYQ9BZA5 131 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 VPS11Q9H270 941 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 OR51B5Q9H339 312 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 ZBTB26Q9HCK0 441 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 LYRM4Q9HD34 91 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 DMRT3Q9NQL9 472 aa18.5■□□□□ 0.55
PDZRN3-202ENST00000308537 A0A088AWK7 358 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 H0YIV9 168 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 CDK2AP1O14519 115 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 CTNSO60931 367 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 MYO1DO94832 1006 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 ETHE1O95571 254 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 INHBAP08476 426 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 GFAPP14136 432 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 ZNF10P21506 573 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 HIST1H1TP22492 207 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 HPDP32754 393 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 PIK3CBP42338 1070 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 ELOAQ14241 798 aaKnown RBP18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 HIST2H2ACQ16777 129 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 C4orf17Q53FE4 359 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 TMEM35AQ53FP2 167 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 LIPJQ5W064 366 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 HIST2H2AA3Q6FI13 130 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 GOLGA7Q7Z5G4 137 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 CLNKQ7Z7G1 428 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 L3MBTL4Q8NA19 623 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 LRRN4CLQ8ND94 238 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 DNAJB8Q8NHS0 232 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 UHMK1Q8TAS1 419 aaKnown RBP18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 WDR20Q8TBZ3 569 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 FRMD6Q96NE9 622 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 EPB41L4BQ9H329 900 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 NFU1Q9UMS0 254 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 OSGIN2Q9Y236 505 aa18.49■□□□□ 0.55
PDZRN3-202ENST00000308537 SAP18O00422 153 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 PLPP1O14494 284 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 OR7A17O14581 309 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 UGDHO60701 494 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 ABHD2P08910 425 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 PCNAP12004 261 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 SERPINB1P30740 379 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 SERPINB9P50453 376 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 TAS2R50P59544 299 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 IGLV3-21P80748 117 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 GTF2H2Q13888 395 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 CRYBG3Q68DQ2 2970 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 GTF2H2CQ6P1K8 395 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 METTL2BQ6P1Q9 378 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 SIAH3Q8IW03 269 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 PTGR2Q8N8N7 351 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 SRFBP1Q8NEF9 429 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 ARMC2Q8NEN0 867 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 OR52B6Q8NGF0 335 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 PTPMT1Q8WUK0 201 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 NCLNQ969V3 563 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 ANKRD9Q96BM1 317 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 CMTM7Q96FZ5 175 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 C5orf34Q96MH7 638 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms