RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 OR2B2Q9GZK3 357 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 F5H0A9 414 aaPredicted RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 SLC1A7O00341 560 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 PCDH17O14917 1159 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 FLRT2O43155 660 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 FAM189A1O60320 539 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 CCND3P30281 292 aaPredicted RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 TMEM44Q2T9K0 475 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 ZNF367Q7RTV3 350 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 MFSD2AQ8NA29 543 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 OR5T1Q8NG75 326 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 OR51A7Q8NH64 312 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 MARCH4Q9P2E8 410 aaPredicted RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 C14orf166Q9Y224 244 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 MT-ND5P03915 603 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SLC35E2BP0CK96 405 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 JAG1P78504 1218 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 BCL2L15Q5TBC7 163 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 DEDD2Q8WXF8 326 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 MGLLQ99685 303 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 VIRMAQ69YN4 1812 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 TVP23AA6NH52 213 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SYN3O14994 580 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 POP7O75817 140 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 ARL6IP5O75915 188 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 RCBTB2O95199 551 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 BPNT1O95861 308 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 CSTBP04080 98 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 MSL3P1P0C860 447 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 GALNT2Q10471 571 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 OR4D1Q15615 310 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 IER5LQ5T953 404 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SHQ1Q6PI26 577 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 CMTM8Q8IZV2 173 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 ZDHHC1Q8WTX9 485 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 HERPUD2Q9BSE4 406 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 CCDC86Q9H6F5 360 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 ZNF696Q9H7X3 374 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 MEAF6Q9HAF1 191 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 GRHPRQ9UBQ7 328 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SEC14L4Q9UDX3 406 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SIX4Q9UIU6 781 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 PRSS51A0A1B0GVH4 220 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 ZNF726A6NNF4 738 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 NFATC1O95644 943 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 LCKP06239 509 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 H2AFB2P0C5Z0 115 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 TECRLQ5HYJ1 363 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 PNLDC1Q8NA58 520 aaKnown RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 PCBD2Q9H0N5 130 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 H3BMQ9 156 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 SOX30O94993 753 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 KAT7O95251 611 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 EBLN1P0CF75 366 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 HLA-EP13747 358 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 DPY19L3Q6ZPD9 716 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 COG8Q96MW5 612 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 WDR77Q9BQA1 342 aaPredicted RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 SEZ6LQ9BYH1 1024 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 WDR26Q9H7D7 661 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 MAN2C1Q9NTJ4 1040 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 LCHNA4D1U4 455 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 DUXAA6NLW8 204 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 H0YAE9 185 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 GNRH1P01148 92 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 MAS1P04201 325 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 SPARCP09486 303 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 GPR4P46093 362 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 GAS6Q14393 721 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 TMEM69Q5SWH9 247 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 CFAP77Q6ZQR2 320 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 OR52B6Q8NGF0 335 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 OSBPL2Q9H1P3 480 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 ANKHQ9HCJ1 492 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 FEZF1A0PJY2 475 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 H7BY64 318 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 TLE2Q04725 743 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 AIMP2Q13155 320 aaKnown RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 HSD17B12Q53GQ0 312 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 NOXRED1Q6NXP6 359 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 ARSKQ6UWY0 536 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 ABHD13Q7L211 337 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 NPAS4Q8IUM7 802 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 TBC1D15Q8TC07 691 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 SLC5A11Q8WWX8 675 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 OVCA2Q8WZ82 227 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 PRAP1Q96NZ9 151 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 MCHR1Q99705 422 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 DPYSL5Q9BPU6 564 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 A0A1B0GVC2 190 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 A6NIN4 97 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 NPIPA5E9PKD4 350 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 UBXN7O94888 489 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms