RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SYNPO2LQ9H987 977 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 RAD18Q9NS91 495 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 SEC14L3Q9UDX4 400 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 TCRBV5S2A0A599 114 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 TRBC2A0A5B9 178 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 SLC22A2O15244 555 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 LRRTM2O43300 516 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 PI15O43692 258 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 B4GALT2O60909 372 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 DNAJC13O75165 2243 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 PSIP1O75475 530 aaKnown RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ASLP04424 464 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 LCKP06239 509 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 NTSR1P30989 418 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 IGFALSP35858 605 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 VBP1P61758 197 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CDK6Q00534 326 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CTU2Q2VPK5 515 aaKnown RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 TOR1AIP1Q5JTV8 583 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 PPP4R4Q6NUP7 873 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 TSSK4Q6SA08 328 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 TRIM46Q7Z4K8 759 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 KRT78Q8N1N4 520 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 HM13Q8TCT9 377 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 C12orf43Q96C57 262 aaKnown RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 VPS35Q96QK1 796 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 SH3GL1Q99961 368 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CCDC3Q9BQI4 270 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CPPED1Q9BRF8 314 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ZNF576Q9H609 170 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 RNF167Q9H6Y7 350 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 FBXL21Q9UKT6 434 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ATG4BQ9Y4P1 393 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 COL4A3Q01955 1670 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 JRKO75564 520 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CBSLP0DN79 551 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CKMT1AP12532 417 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 NDUFV2P19404 249 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 DDX6P26196 483 aaKnown RBP eCLIP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 HTR1EP28566 365 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CBSP35520 551 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ENTPD1P49961 510 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 DAB2P98082 770 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 MAT1AQ00266 395 aaKnown RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 UBE3AQ05086 875 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 MXD1Q05195 221 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CBLBQ13191 982 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 RAB39AQ14964 217 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 RGNQ15493 299 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ZNF776Q68DI1 518 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 OR2T5Q6IEZ7 315 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-201ENST00000258607 IQCHQ86VS3 1027 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 DCUN1D3Q8IWE4 304 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 SLC5A8Q8N695 610 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 HORMAD2Q8N7B1 307 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 DNAJC5GQ8N7S2 189 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 C11orf65Q8NCR3 313 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 OR9A2Q8NGT5 310 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 OR2T29Q8NH02 315 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ZNF597Q96LX8 424 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 CAMK1GQ96NX5 476 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 KCNH6Q9H252 994 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 VCX3AQ9NNX9 186 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 TMEM74BQ9NUR3 256 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 ADPRHL2Q9NX46 363 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 DNAJC27Q9NZQ0 273 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 SLC13A4Q9UKG4 626 aa8.67□□□□□ -1.02
CKAP2-201ENST00000258607 LAMA5O15230 3695 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 MTCL1Q9Y4B5 1905 aaKnown RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 LOC100130705A0A1B0GUX0 176 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 CPSF4LA6NMK7 179 aaKnown RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ANHXE9PGG2 379 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 H3BNH8 94 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 NPC1O15118 1278 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 VILLO15195 856 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ADAM23O75077 832 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ERN1O75460 977 aaKnown RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 DBTP11182 482 aaKnown RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 KELP23276 732 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 CTSKP43235 329 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 CCR4P51679 360 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 VSX2P58304 361 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 MPEG1Q2M385 716 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 EXOC3L2Q2M3D2 409 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 FCRLBQ6BAA4 426 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 GPR149Q86SP6 731 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 PROSER1Q86XN7 944 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 KLHDC8AQ8IYD2 350 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ZZZ3Q8IYH5 903 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 LGI4Q8N135 537 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 UBE2J2Q8N2K1 259 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 MARVELD2Q8N4S9 558 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 Q8N9G6 341 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 OR13H1Q8NG92 308 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 WDR20Q8TBZ3 569 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 TBX5Q99593 518 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 NIPSNAP1Q9BPW8 284 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms