RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 M0R233 179 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 AKAP8O43823 692 aaKnown RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 ASGR2P07307 311 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 SAGP10523 405 aaPredicted RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 KCNC1P48547 511 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 PPP2R2BQ00005 443 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 GNA13Q14344 377 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 PGBD2Q6P3X8 592 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 LINGO2Q7L985 606 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 SLC9A6Q92581 669 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 MAL2Q969L2 176 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 DOHHQ9BU89 302 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 FAIM2Q9BWQ8 316 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 FARSBQ9NSD9 589 aaKnown RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 BCHEP06276 602 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 C8GP07360 202 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 PCSK2P16519 638 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 JUNBP17275 347 aaPredicted RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 DNASE1P24855 282 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 RPL4P36578 427 aaKnown RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 OMPP47874 163 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 C1QTNF12Q5T7M4 302 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 CCSAPQ6IQ19 270 aaPredicted RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 ZNF767PQ75MW2 155 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 CCDC120Q96HB5 630 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 DHRS1Q96LJ7 313 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 NLE1Q9NVX2 485 aaPredicted RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 DSTNP60981 165 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 TSPAN5P62079 268 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 GRIN2CQ14957 1233 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 TICAM1Q8IUC6 712 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 CLECL1Q8IZS7 167 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 ASB15Q8WXK1 588 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 FUZQ9BT04 418 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 RABL2BQ9UNT1 228 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 MAB21L2Q9Y586 359 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 NUP205Q92621 2012 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 PDYNP01213 254 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 ARCN1P48444 511 aaKnown RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 CDKN1CP49918 316 aaPredicted RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 SERINC3Q13530 473 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 PTCRAQ6ISU1 281 aaPredicted RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 FAM86B1Q8N7N1 296 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 MRPL43Q8N983 215 aaKnown RBP11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 SLC43A3Q8NBI5 491 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 GPR151Q8TDV0 419 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 RHBGQ9H310 441 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 N6AMT1Q9Y5N5 214 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 STON1Q9Y6Q2 735 aa11.09□□□□□ -0.63
DNMT3B-201ENST00000201963 ADH1CP00326 375 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ANXA3P12429 323 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CXCR2P25025 360 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CNR2P34972 360 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 RGS6P49758 472 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ZXDBP98169 803 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 KEAP1Q14145 624 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 PLA2G4EQ3MJ16 856 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ANKRD54Q6NXT1 300 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 DHRS4L2Q6PKH6 230 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 RNF44Q7L0R7 432 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 OXR1Q8N573 874 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 NEIL3Q8TAT5 605 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 KHSRPQ92945 711 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■■□□□ 14.3
DNMT3B-201ENST00000201963 CMTM7Q96FZ5 175 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 TEX37Q96LM6 180 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 INIPQ9NRY2 104 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 TREX1Q9NSU2 369 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 TBC1D24Q9ULP9 559 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 NUP214P35658 2090 aaPredicted RBP11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 A0A0G2JN53 185 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 DAPL1A0PJW8 107 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CLDN7O95471 211 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 C6orf47O95873 294 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 IGFBP6P24592 240 aaPredicted RBP11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 SOX3P41225 446 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 MAGEA2P43356 314 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CEACAM20Q6UY09 585 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 LHFPL3Q86UP9 236 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CNTN4Q8IWV2 1026 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 SPPL3Q8TCT6 385 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 TXNDC15Q96J42 360 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 HYLS1Q96M11 299 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ZNF583Q96ND8 569 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 SNX18Q96RF0 628 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ATOH8Q96SQ7 321 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 FXYD6-FXYD2A0A087WZ82 144 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 HMX3A6NHT5 357 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 ICMTO60725 284 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 GSRP00390 522 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 PEPDP12955 493 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 HPGDP15428 266 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CDH11P55287 796 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 CLDN8P56748 225 aa11.08□□□□□ -0.64
DNMT3B-201ENST00000201963 AP1S1P61966 158 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms