RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	TFPT	P0C1Z6	253 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SHMT2	P34897	504 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PTGER1	P34995	402 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLC30A6	Q6NXT4	461 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TRAF7	Q6Q0C0	670 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FAM180A	Q6UWF9	173 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FAM92B	Q6ZTR7	304 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DGLUCY	Q7Z3D6	616 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	AMIGO1	Q86WK6	493 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SPNS2	Q8IVW8	549 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TMEM156	Q8N614	296 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RHEBL1	Q8TAI7	183 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TXLNGY	Q9BZA5	131 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TM7SF3	Q9NS93	570 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ACSL6	Q9UKU0	697 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	B4GALT3	O60512	393 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	IFNG	P01579	166 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C9	P02748	559 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	S100A1	P23297	94 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZXDA	P98168	799 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	THOC7	Q6I9Y2	204 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PLXDC1	Q8IUK5	500 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	UTP4	Q969X6	686 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ABCB10	Q9NRK6	738 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FARSB	Q9NSD9	589 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	VEGFD	O43915	354 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GM2A	P17900	193 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	AOC1	P19801	751 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	NUDT6	P53370	316 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SRP54	P61011	504 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CATSPERE	Q5SY80	951 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C6orf132	Q5T0Z8	1188 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	KIAA0895L	Q68EN5	471 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SDR16C5	Q8N3Y7	309 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	AMER2	Q8N7J2	671 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	HUS1B	Q8NHY5	278 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DENND1A	Q8TEH3	1009 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	IFT27	Q9BW83	186 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	KCNH6	Q9H252	994 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DUXA	A6NLW8	204 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	POLR1C	O15160	346 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PENK	P01210	267 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PDHA2	P29803	388 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	KHK	P50053	298 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ERVPABLB-1	P60509	514 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	MXD1	Q05195	221 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	LGALS3BP	Q08380	585 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF311	Q5JNZ3	666 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997		Q6ZS52	159 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FAM160A2	Q8N612	972 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PIGX	Q8TBF5	258 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CNDP2	Q96KP4	475 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RPP25	Q9BUL9	199 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CALML5	Q9NZT1	146 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZSWIM7	Q19AV6	140 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C1orf189	Q5VU69	101 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	NANOGP8	Q6NSW7	305 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DCP2	Q8IU60	420 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TMC8	Q8IU68	726 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	MCEMP1	Q8IX19	187 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CD200R1	Q8TD46	325 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	NANOG	Q9H9S0	305 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	BRD7	Q9NPI1	651 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	WDR90	Q96KV7	1748 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	HHLA1	C9JL84	531 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SOX14	O95416	240 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CBL	P22681	906 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	XK	P51811	444 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLAMF1	Q13291	335 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	NR0B2	Q15466	257 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CXorf57	Q6NSI4	855 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C11orf88	Q6PI97	169 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLC22A15	Q8IZD6	547 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	LGI4	Q8N135	537 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR13J1	Q8NGT2	312 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF689	Q96CS4	500 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RANBP9	Q96S59	729 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PKP2	Q99959	881 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GPATCH1	Q9BRR8	931 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TTYH1	Q9H313	450 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CLEC4E	Q9ULY5	219 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OARD1	Q9Y530	152 aa		13.75	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SOBP	A7XYQ1	873 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	NADK	O95544	446 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TIMP2	P16035	220 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FOXA1	P55317	472 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	2e-13	■■■□□ 18.3
NEDD4L-238	ENST00000635997	PHOSPHO1	Q8TCT1	267 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ASB9	Q96DX5	294 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DPH2	Q9BQC3	489 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SPRTN	Q9H040	489 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	IFT80	Q9P2H3	777 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GPC6	Q9Y625	555 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997		E7EQ34	232 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLC7A1	P30825	629 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DNAJB13	P59910	316 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	HHEX	Q03014	270 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SFT2D3	Q587I9	215 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms