RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FAM214AQ32MH5 1076 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 DHRS13Q6UX07 377 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 Q6ZSR9 355 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 CLEC4FQ8N1N0 589 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR4C6Q8NH72 309 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZUFSPQ96AP4 578 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 TMEM125Q96AQ2 219 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 C1orf109Q9NX04 203 aa11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 POLR3HQ9Y535 204 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-207ENST00000628646 ARHGEF17Q96PE2 2063 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PPM1DO15297 605 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 TNFAIP8O95379 198 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ALBP02768 609 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 GBAP04062 536 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 COX7A2P14406 83 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 AGXTP21549 392 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PRDX1Q06830 199 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PCBP2Q15366 365 aaKnown RBP eCLIP11.9□□□□□ -0.52e-7■■■■■ 41.9
SYNGAP1-207ENST00000628646 NHSL2Q5HYW2 709 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PAGE3Q5JUK9 113 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ARHGAP40Q5TG30 622 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 STPG1Q5TH74 334 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 C1orf189Q5VU69 101 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ISLR2Q6UXK2 745 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 TTLL10Q6ZVT0 673 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ASPGQ86U10 573 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 IL22RA1Q8N6P7 574 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ANKFN1Q8N957 763 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 AGBL5Q8NDL9 886 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZFYVE21Q9BQ24 234 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 MACROD1Q9BQ69 325 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 SEMA6AQ9H2E6 1030 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 TMEM184CQ9NVA4 438 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 SPHK1Q9NYA1 384 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 CDC14AQ9UNH5 594 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 CCL27Q9Y4X3 112 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PCYT1BQ9Y5K3 369 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 SNX8Q9Y5X2 465 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 TNRC18O15417 2968 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 DOCK9Q9BZ29 2069 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR5K3A6NET4 321 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 C9J4A7 227 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PLOD2O00469 737 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR10H2O60403 315 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 BMP2P12643 396 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC23A3Q6PIS1 610 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 CANT1Q8WVQ1 401 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 MR1Q95460 341 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 CMTM7Q96FZ5 175 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 C17orf62Q9BQA9 187 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 CCM2LQ9NUG4 571 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLAMF8Q9P0V8 285 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ANKRD28O15084 1053 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 B3GALT2O43825 422 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 POLE2P56282 527 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ACY1Q03154 408 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 DEFB134Q4QY38 66 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 LCN8Q6JVE9 175 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 SPESP1Q6UW49 350 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 DNAJC14Q6Y2X3 702 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ABHD13Q7L211 337 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZNF555Q8NEP9 628 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 LRRC58Q96CX6 371 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 MMABQ96EY8 250 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ITCHQ96J02 903 aa11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 REXO4Q9GZR2 422 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 ASCC3Q8N3C0 2202 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-207ENST00000628646 PGM3O95394 542 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 C9P02748 559 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 IL6P05231 212 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 GSTT1P30711 240 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 GFERP55789 205 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ERVPABLB-1P60509 514 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 E2F1Q01094 437 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 STX4Q12846 297 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 GPR180Q86V85 440 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 NAXDQ8IW45 347 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 PDPRQ8NCN5 879 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZC3H10Q96K80 434 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 CNBD2Q96M20 576 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 OSBPL11Q9BXB4 747 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 LRRN3Q9H3W5 708 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 VPS29Q9UBQ0 182 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ICKQ9UPZ9 632 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 SOCS2O14508 198 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZBTB11O95625 1053 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 PKLRP30613 574 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 HPCAL1P37235 193 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRIP6Q15654 476 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 LCTLQ6UWM7 567 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 WASH2PQ6VEQ5 465 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 PTRH1Q86Y79 214 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 WASH6PQ9NQA3 447 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRPS1Q9UHF7 1281 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 GFYI3L273 518 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms