RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ZNF699Q32M78 642 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 MANEAQ5SRI9 462 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZNF678Q5SXM1 525 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 VASNQ6EMK4 673 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 RGS7BPQ6MZT1 257 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 ABI3BPQ7Z7G0 1075 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 PHYKPLQ8IUZ5 450 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 FTMTQ8N4E7 242 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 DCBLD1Q8N8Z6 715 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 BVESQ8NE79 360 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR10Q1Q8NGQ4 319 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR9Q1Q8NGQ5 310 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 METTL21AQ8WXB1 218 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 UCN3Q969E3 161 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ISG20Q96AZ6 181 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 WBP1Q96G27 269 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 CCDC115Q96NT0 180 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR5M11Q96RB7 305 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 KCNA7Q96RP8 456 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 RAD9AQ99638 391 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR51M1Q9H341 326 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PRDM12Q9H4Q4 367 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZNF275Q9NSD4 429 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 UFSP2Q9NUQ7 469 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 AIG1Q9NVV5 245 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 MED9Q9NWA0 146 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SPHK1Q9NYA1 384 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SLC6A14Q9UN76 642 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SSR3Q9UNL2 185 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 A0A087WZ62 844 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 RRN3P2A6NIE6 340 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 C9P02748 559 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 S100A8P05109 93 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 HBQ1P09105 142 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 HAPLN1P10915 354 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 HOXB6P17509 224 aaKnown RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 PVALBP20472 110 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 RORAP35398 523 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 VSX2P58304 361 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 IL18Q14116 193 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 MLC1Q15049 377 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 UNC50Q53HI1 259 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 OR2T5Q6IEZ7 315 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 MACC1Q6ZN28 852 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CCDC71Q8IV32 467 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 CMIPQ8IY22 773 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 TMEM132CQ8N3T6 1108 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 OR2T29Q8NH02 315 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 UBA3Q8TBC4 463 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 FUBP1Q96AE4 644 aaKnown RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 RAD51AP1Q96B01 352 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CSPG4P5Q96PW8 444 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CRB3Q9BUF7 120 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 ERVK-6Q9BXR3 956 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 NKX6-2Q9C056 277 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 HDHD2Q9H0R4 259 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 ALG9Q9H6U8 611 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 GLRX2Q9NS18 164 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 SLC22A11Q9NSA0 550 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 PLCXD1Q9NUJ7 323 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 VNN3Q9NY84 501 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 SAMHD1Q9Y3Z3 626 aaKnown RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 ASB4Q9Y574 426 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 LCHNA4D1U4 455 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 KCNK1O00180 336 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 TO15178 435 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 TOXO94900 526 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 ZNF682O95780 498 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 LPLP06858 475 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 ACAA1P09110 424 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 UBA1P22314 1058 aaKnown RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 STAT5BP51692 787 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CLCN5P51795 746 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 HMGCS2P54868 508 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 FOXA1P55317 472 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 COL9A2Q14055 689 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 OPCMLQ14982 345 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 MPEG1Q2M385 716 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CARD16Q5EG05 197 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 NHLRC3Q5JS37 347 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 PCID2Q5JVF3 399 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 NCBP2-AS2Q69YL0 99 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 FRMPD2BQ6IN97 320 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 NAPEPLDQ6IQ20 393 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 SLC25A25Q6KCM7 469 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 TRNP1Q6NT89 227 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 HAGHLQ6PII5 290 aaPredicted RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 C12orf40Q86WS4 652 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 TMEM145Q8NBT3 493 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 OR11H7Q8NGC8 314 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 PYURFQ96I23 114 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CAMK1GQ96NX5 476 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 SLC38A2Q96QD8 506 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 SIK2Q9H0K1 926 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 MIXL1Q9H2W2 232 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 TFB2MQ9H5Q4 396 aaKnown RBP7.61□□□□□ -1.19
VPS11-209ENST00000622309 UCK1Q9HA47 277 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 NEUROD4Q9HD90 331 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms