RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 THOC6Q86W42 341 aaKnown RBP9.74□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF227Q86WZ6 799 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 CEP112Q8N8E3 955 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 ANKRD53Q8N9V6 530 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 FAM98AQ8NCA5 519 aaKnown RBP9.74□□□□□ -0.85
VPS4B-207ENST00000591519 LRRN4CLQ8ND94 238 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 CREB3L4Q8TEY5 395 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 PTCHD1Q96NR3 888 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 RHOXF2Q9BQY4 288 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 HES7Q9BYE0 225 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 SPNS1Q9H2V7 528 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 PELI2Q9HAT8 420 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 KLHL1Q9NR64 748 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 SMYD2Q9NRG4 433 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 IKZF3Q9UKT9 509 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 PPIEQ9UNP9 301 aaKnown RBP9.74□□□□□ -0.85
VPS4B-207ENST00000591519 MEMO1Q9Y316 297 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 KCNE2Q9Y6J6 123 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 SAGE2PA6NJ88 616 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 NPIPA5E9PKD4 350 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 EIF3HO15372 352 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 NME2P1O60361 137 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 B4GALT2O60909 372 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 GUCA1CO95843 209 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 B3GALT4O96024 378 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF888P0CJ79 500 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 RNH1P13489 461 aaKnown RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF37AP17032 561 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 NME2P22392 152 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 TPP2P29144 1249 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 CYB561P49447 251 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 HNMTP50135 292 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 HLCSP50747 726 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 GPX6P59796 221 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 OLR1P78380 273 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 REEP5Q00765 189 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 OC90Q02509 493 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 C3orf62Q6ZUJ4 267 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 CHERPQ8IWX8 916 aaKnown RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 CTAGE3PQ8IX95 158 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 KLHDC8AQ8IYD2 350 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 KIF2BQ8N4N8 673 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 NKAPQ8N5F7 415 aaKnown RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 MRRFQ96E11 262 aaKnown RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF837Q96EG3 531 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-207ENST00000591519 SEC16BQ96JE7 1060 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 AIF1LQ9BQI0 150 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 RBCK1Q9BYM8 510 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 KLHL31Q9H511 634 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 MOCS1Q9NZB8 636 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 TINAGQ9UJW2 476 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 NPIPA1Q9UND3 350 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 SLC22A14Q9Y267 594 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 MMACHCQ9Y4U1 282 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 CSMD1Q96PZ7 3565 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 PDZD2O15018 2839 aa9.73□□□□□ -0.85
VPS4B-207ENST00000591519 CXorf49A8MYA2 514 aaPredicted RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 FAM227AF5H4B4 570 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 CDC7O00311 574 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 SLC25A12O75746 678 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 SERPIND1P05546 499 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ST13P50502 369 aaKnown RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 GPR143P51810 404 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 RAB8AP61006 207 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF460Q14592 562 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 EFTUD2Q15029 972 aaKnown RBP eCLIP9.72□□□□□ -0.852e-7■■■□□ 17.5
VPS4B-207ENST00000591519 TERF2Q15554 542 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 MAPKAPK3Q16644 382 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 UBAP2Q5T6F2 1119 aaKnown RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ZC3HC1Q86WB0 502 aaKnown RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 DOLPP1Q86YN1 238 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF295-AS1Q8N0V1 137 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 CA13Q8N1Q1 262 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 GHDCQ8N2G8 530 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 POGLUT1Q8NBL1 392 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ACBD4Q8NC06 268 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 APCDD1LQ8NCL9 501 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 C16orf52Q8NHV5 167 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 PHF10Q8WUB8 498 aaKnown RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 MAGED4Q96JG8 741 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 TSNARE1Q96NA8 513 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 MCMBPQ9BTE3 642 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 NPLQ9BXD5 320 aaPredicted RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 PITHD1Q9GZP4 211 aaPredicted RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 AICDAQ9GZX7 198 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 NT5DC2Q9H857 520 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 GPAMQ9HCL2 828 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 NECTIN3Q9NQS3 549 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ZDHHC18Q9NUE0 388 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 MTRF1LQ9UGC7 380 aaKnown RBP9.72□□□□□ -0.85
VPS4B-207ENST00000591519 DYRK1BQ9Y463 629 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 OARD1Q9Y530 152 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 ASB1Q9Y576 335 aa9.72□□□□□ -0.85
VPS4B-207ENST00000591519 FAM95CA0A1B0GW59 222 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TCRBV9S1A1TA0A576 114 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 LRIT2A6NDA9 550 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 E9PLN8 166 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms