RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 RELAQ04206 551 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 SLC9A5Q14940 896 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 MLC1Q15049 377 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
LIG3-205ENST00000585941 PRRT3Q5FWE3 981 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 EIF3MQ7L2H7 374 aaKnown RBP13.51□□□□□ -0.25
LIG3-205ENST00000585941 PAQR7Q86WK9 346 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 RBM12BQ8IXT5 1001 aaKnown RBP13.51□□□□□ -0.25
LIG3-205ENST00000585941 GJD3Q8N144 294 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 SLC22A18ASQ8N1D0 253 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 FAM86B1Q8N7N1 296 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 PNPT1Q8TCS8 783 aaKnown RBP13.51□□□□□ -0.25
LIG3-205ENST00000585941 TFAP2CQ92754 450 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 TBC1D20Q96BZ9 403 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 MS4A6EQ96DS6 147 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 THAP11Q96EK4 314 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 KLHDC7BQ96G42 594 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 RDH12Q96NR8 316 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 NLNQ9BYT8 704 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 CHRDQ9H2X0 955 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 TMEM38AQ9H6F2 299 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 NTN4Q9HB63 628 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 ADPRHL2Q9NX46 363 aa13.51□□□□□ -0.25
LIG3-205ENST00000585941 SMPD3Q9NY59 655 aaPredicted RBP13.51□□□□□ -0.25
LIG3-205ENST00000585941 IGHV1OR15-9A0A0B4J2B8 117 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 PDLIM1O00151 329 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 UPK1AO00322 258 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 EI24O14681 340 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 TNFSF14O43557 240 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 MT-ND1P03886 318 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 NTRK1P04629 796 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 CRATP43155 626 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ALDH9A1P49189 494 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 PLA2G16P53816 162 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 STARD6P59095 220 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 RGS1Q08116 209 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 NKG7Q16617 165 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ZNF630Q2M218 657 aaPredicted RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 TJAP1Q5JTD0 557 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 GCNT6Q5T4J0 391 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 CBLL1Q75N03 491 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 CARM1Q86X55 608 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 C17orf62Q9BQA9 187 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 OSBPL10Q9BXB5 764 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 LTB4R2Q9NPC1 389 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ZSCAN32Q9NX65 697 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 CPNE7Q9UBL6 633 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 G3V2T6 193 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 BTN3A3O00478 584 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ERI3O43414 337 aaKnown RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 TMPRSS11DO60235 418 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 NDUFS2O75306 463 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 TNFRSF21O75509 655 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ZNF682O95780 498 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 IFNA14P01570 189 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 CTSEP14091 401 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 HIST1H1TP22492 207 aaPredicted RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 MAGEA8P43361 318 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 PRIM2P49643 509 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 MVDP53602 400 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 MANFP55145 182 aaKnown RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 MERTKQ12866 999 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 EPS8Q12929 822 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 EIF2B5Q13144 721 aaKnown RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 GPR18Q14330 331 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 FZD2Q14332 565 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 UBXN2BQ14CS0 331 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 TOR1AIP1Q5JTV8 583 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIG3-205ENST00000585941 ABHD17CQ6PCB6 329 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ANGPTL8Q6UXH0 198 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 PARGQ86W56 976 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 NAGSQ8N159 534 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 AVL9Q8NBF6 648 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ZFP28Q8NHY6 868 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 NT5CQ8TCD5 201 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 TEFMQ96QE5 360 aaKnown RBP13.5□□□□□ -0.25
LIG3-205ENST00000585941 ADI1Q9BV57 179 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ROGDIQ9GZN7 287 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 ZNF696Q9H7X3 374 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 IL1RAPQ9NPH3 570 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 UBAP1Q9NZ09 502 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 BAG5Q9UL15 447 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
LIG3-205ENST00000585941 GOLGA4Q13439 2230 aaKnown RBP13.49□□□□□ -0.25
LIG3-205ENST00000585941 OR2A25A4D2G3 310 aa13.49□□□□□ -0.25
LIG3-205ENST00000585941 URADA6NGE7 173 aa13.49□□□□□ -0.25
LIG3-205ENST00000585941 EIF4E1BA6NMX2 242 aaKnown RBP13.49□□□□□ -0.25
LIG3-205ENST00000585941 C2orf74A8MZ97 194 aa13.49□□□□□ -0.25
LIG3-205ENST00000585941 ATP5A1P25705 553 aaKnown RBP13.49□□□□□ -0.25
LIG3-205ENST00000585941 SOAT1P35610 550 aa13.49□□□□□ -0.25
LIG3-205ENST00000585941 ARSFP54793 590 aa13.49□□□□□ -0.25
LIG3-205ENST00000585941 UBE2IP63279 158 aaKnown RBP13.49□□□□□ -0.25
LIG3-205ENST00000585941 HYAL2Q12891 473 aa13.49□□□□□ -0.25
LIG3-205ENST00000585941 DAG1Q14118 895 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms