RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 NPLQ9BXD5 320 aaPredicted RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 IQCGQ9H095 443 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 OR51B5Q9H339 312 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ELOVL6Q9H5J4 265 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 SEMA4BQ9NPR2 832 aaPredicted RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PRDM9Q9NQV7 894 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PRTFDC1Q9NRG1 225 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PLA2G3Q9NZ20 509 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ABI3Q9P2A4 366 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 FETUBQ9UGM5 382 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PLAAQ9Y263 795 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 RNF11Q9Y3C5 154 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ASB1Q9Y576 335 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 COPG1Q9Y678 874 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 HECTD1Q9ULT8 2610 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 UBR5O95071 2799 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 LOC102723996A0A087X1L8 192 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ARHGAP10A1A4S6 786 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CCDC151A5D8V7 595 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 STX16-NPEPL1H3BU86 382 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 RTCAO00442 366 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 E2F3O00716 465 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 COPEO14579 308 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 STX16O14662 325 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 DYRK3O43781 588 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 KLK8O60259 260 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF500O60304 480 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 UGDHO60701 494 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 PRAMEF4O60810 478 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CRCPO75575 148 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 MYO1DO94832 1006 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 OTCP00480 354 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 F10P00742 488 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SHBGP04278 402 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 GSTA1P08263 222 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SMIM10L1P0DMW3 83 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 MYL2P10916 166 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ITGAMP11215 1152 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 TSPAN8P19075 237 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 EPORP19235 508 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CD22P20273 847 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 HIST1H1TP22492 207 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CPN2P22792 545 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ATP5A1P25705 553 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CERS1P27544 350 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 MAGEA12P43365 314 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CDH13P55290 713 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 LIM2P55344 173 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 HSD17B7P56937 341 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 RHAGQ02094 409 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 OC90Q02509 493 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 MFAP5Q13361 173 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 RUNX2Q13950 521 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ELOAQ14241 798 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 NAA30Q147X3 362 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 PCOLCEQ15113 449 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 INPP5JQ15735 1006 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CFAP157Q5JU67 520 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ACER2Q5QJU3 275 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 DEPDC1Q5TB30 811 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 PRAMEF9Q5VWM5 478 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SLC6A19Q695T7 634 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 FCRLBQ6BAA4 426 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 PLAG1Q6DJT9 500 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ADNP2Q6IQ32 1131 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 GRHL2Q6ISB3 625 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 PAPD4Q6PIY7 484 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 IGFL3Q6UXB1 125 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 TIFABQ6ZNK6 161 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CLNKQ7Z7G1 428 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF595Q8IYB9 648 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 LAS2Q8IYD9 372 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SHISA5Q8N114 240 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CA13Q8N1Q1 262 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SLC5A8Q8N695 610 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 RBMXL3Q8N7X1 1067 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ACOT4Q8N9L9 421 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 FAM47BQ8NA70 645 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 M1APQ8TC57 530 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ADAMTS18Q8TE60 1221 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 TRPC4APQ8TEL6 797 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF473Q8WTR7 871 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 TSLPQ969D9 159 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ISL2Q96A47 359 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 RBM18Q96H35 190 aaKnown RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SMIM10Q96HG1 83 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 IMMP1LQ96LU5 166 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF354BQ96LW1 612 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CDK15Q96Q40 435 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 WDR77Q9BQA1 342 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 DEFB126Q9BYW3 111 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 SLC29A3Q9BZD2 475 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CLMPQ9H6B4 373 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 PPCSQ9HAB8 311 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 WDR41Q9HAD4 459 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 ZBTB20Q9HC78 741 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 AGPAT4Q9NRZ5 378 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 NMRK1Q9NWW6 199 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 MS4A12Q9NXJ0 267 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms