RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 WDR55Q9H6Y2 383 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 TCF7L2Q9NQB0 619 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 C1orf109Q9NX04 203 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 AHSPQ9NZD4 102 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMEM9Q9P0T7 183 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMED5Q9Y3A6 229 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 FIS1Q9Y3D6 152 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 COL5A1P20908 1838 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 A0A0J9YVX5 310 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ATP6AP2A0A1C7CYW4 349 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 FITM1A5D6W6 292 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 URADA6NGE7 173 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 H0YGG7 62 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 H3BMH7 237 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 NRP2O60462 931 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 SKAP2O75563 359 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 RFPL3O75679 317 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ATP6AP2O75787 350 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 TGFB1P01137 390 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 SLC35G6P0C7Q6 338 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 SMIM10L1P0DMW3 83 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 PCNAP12004 261 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 CEACAM1P13688 526 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 LBPP18428 481 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ADSLP30566 484 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 MRPL19P49406 292 aaKnown RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 PPM1FP49593 454 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 ARF3P61204 181 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 STXBP1P61764 594 aaKnown RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 HMGCS1Q01581 520 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ACY1Q03154 408 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 RGS1Q08116 209 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 MAD2L1Q13257 205 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 SPIDRQ14159 915 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 TERF2Q15554 542 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 IMPG1Q17R60 797 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 PRTGQ2VWP7 1150 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 LSM12Q3MHD2 195 aaKnown RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 ATP6AP1LQ52LC2 224 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 RFTN2Q52LD8 501 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 SGO1Q5FBB7 561 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 GARNL3Q5VVW2 1013 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ADNP2Q6IQ32 1131 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ZFAND4Q86XD8 727 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 METTL4Q8N3J2 472 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ARHGEF39Q8N4T4 335 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ZNF655Q8N720 491 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 CCDC197Q8NCU1 140 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 OR2T11Q8NH01 316 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 RERGQ96A58 199 aaPredicted RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 TUBGCP3Q96CW5 907 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 SMIM10Q96HG1 83 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 FCRL1Q96LA6 429 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 DHRS1Q96LJ7 313 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 FCRL4Q96PJ5 515 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 CENPKQ9BS16 269 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 SYNPO2LQ9H987 977 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 LRTM1Q9HBL6 345 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 TMEM45AQ9NWC5 275 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ASIC5Q9NY37 505 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 WBP11Q9Y2W2 641 aaKnown RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 SLC22A7Q9Y694 548 aa7.62□□□□□ -1.19
COPS3-215ENST00000578317 ZFC3H1O60293 1989 aaKnown RBP7.62□□□□□ -1.19
COPS3-215ENST00000578317 TP53BP1Q12888 1972 aaPredicted RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 ASXL3Q9C0F0 2248 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 FAM186AA6NE01 2351 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 LOC105369274A0A096LPK9 316 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 LOC102723532A0A0G2JNH3 316 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 GNB5O14775 395 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 CASC3O15234 703 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 TMPRSS2O15393 492 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 NDUFS4O43181 175 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 CCDC22O60826 627 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 PEX11AO75192 247 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 ETHE1O95571 254 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 ERVK-8P63133 956 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 GABPB1Q06547 395 aaPredicted RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 DDX39BQ13838 428 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 FAM53BQ14153 422 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 GSTA3Q16772 222 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 SPIN4Q56A73 249 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 SPDYAQ5MJ70 313 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 WASHC2DQ5SRD0 308 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 SLC6A19Q695T7 634 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 FRMPD2BQ6IN97 320 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 NIPAL1Q6NVV3 410 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 ABHD17CQ6PCB6 329 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 RBM44Q6ZP01 1051 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 MRPL41Q8IXM3 137 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 FAM9CQ8IZT9 166 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 OR4N4Q8N0Y3 316 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 CPSF7Q8N684 471 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 CSNK1A1LQ8N752 337 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 OR2L5Q8NG80 312 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 OR8K5Q8NH50 307 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 RGMAQ96B86 450 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 MS4A6EQ96DS6 147 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 THOC1Q96FV9 657 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 RILPQ96NA2 401 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 KCNC2Q96PR1 638 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms