RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 THAP3Q8WTV1 239 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 KIAA1191Q96A73 305 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 SEC16BQ96JE7 1060 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 UBXN10Q96LJ8 280 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CSF3RQ99062 836 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 DEFB126Q9BYW3 111 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 PITHD1Q9GZP4 211 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 REXO4Q9GZR2 422 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 TRIM45Q9H8W5 580 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 PNO1Q9NRX1 252 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 TINAGQ9UJW2 476 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 ZNF223Q9UK11 482 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 PTBP2Q9UKA9 531 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 ZNF490Q9ULM2 529 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 ENTPD4Q9Y227 616 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 ASB1Q9Y576 335 aa16.28■□□□□ 0.2
MAP1LC3B-207ENST00000565788 A0A088AWK7 358 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CDK2AP1O14519 115 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 B3GALT2O43825 422 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 NME2P1O60361 137 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 MYO1DO94832 1006 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 MLYCDO95822 493 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 EPORP19235 508 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 ZNF10P21506 573 aaPredicted RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 NME2P22392 152 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CERS1P27544 350 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 GRNP28799 593 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 TRHRP34981 398 aaPredicted RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 SPRP35270 261 aaPredicted RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 KCNC1P48547 511 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CYB561P49447 251 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 DLG1Q12959 904 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 TRADDQ15628 312 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 PDK4Q16654 411 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 KBTBD12Q3ZCT8 623 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 GRTP1Q5TC63 336 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 TRIM40Q6P9F5 258 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CMC1Q7Z7K0 106 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 MRGPRGQ86SM5 289 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 CCDC25Q86WR0 208 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 SIAH3Q8IW03 269 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 ARMC10Q8N2F6 343 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 B3GNT7Q8NFL0 401 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 OR2L5Q8NG80 312 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 FBXO25Q8TCJ0 367 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 WDR34Q96EX3 536 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 PTCD3Q96EY7 689 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 MAGED4Q96JG8 741 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 PHACTR1Q9C0D0 580 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 RNF112Q9ULX5 631 aa16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 UTP11Q9Y3A2 253 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-207ENST00000565788 FCHO1O14526 889 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 S100BP04271 92 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SLC35E2BP0CK96 405 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CASQ1P31415 396 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HLCSP50747 726 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CLCN2P51788 898 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CASP6P55212 293 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LIM2P55344 173 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HSD17B7P56937 341 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SLC13A2Q13183 592 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ART3Q13508 389 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SLMAPQ14BN4 828 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TERF2Q15554 542 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KRTCAP3Q53RY4 240 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ABHD17CQ6PCB6 329 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZDHHC24Q6UX98 284 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CLNKQ7Z7G1 428 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TICAM1Q8IUC6 712 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNF808Q8N4W9 903 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CPSF7Q8N684 471 aaKnown RBP16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ADAMTS18Q8TE60 1221 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 FBF1Q8TES7 1133 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NCLNQ969V3 563 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MARVELD3Q96A59 401 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 F2RL3Q96RI0 385 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SERINC2Q96SA4 455 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 EFCAB11Q9BUY7 163 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ALG9Q9H6U8 611 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 COPS7BQ9H9Q2 264 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 FBXW2Q9UKT8 454 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 DAPP1Q9UN19 280 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNF835Q9Y2P0 537 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PCNX1Q96RV3 2341 aa16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NCOA6Q14686 2063 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-207ENST00000565788 GTF3C1Q12789 2109 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CLDN4O14493 209 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNHIT1O43257 154 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HNRNPRO43390 633 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ASNA1O43681 348 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PRKNO60260 465 aaPredicted RBP16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TFEBP19484 476 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HPDP32754 393 aaPredicted RBP16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MAGEA4P43358 317 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 GPR143P51810 404 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MTTPP55157 894 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ADORA2A-AS1P86434 159 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HSF1Q00613 529 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 IRF8Q02556 426 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms