RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 FAM58BPP0C7Q3 252 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ATP5A1P25705 553 aaKnown RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 FRKP42685 505 aaPredicted RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 FASLGP48023 281 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 LSSP48449 732 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 HNRNPKP61978 463 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP3-213ENST00000559711 ZXDAP98168 799 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 DMWDQ09019 674 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 SLC9A5Q14940 896 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ADRM1Q16186 407 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 SFT2D3Q587I9 215 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ERICH5Q6P6B1 374 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 TRIM40Q6P9F5 258 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ASPGQ86U10 573 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 C17orf82Q86X59 251 aaPredicted RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ANKFN1Q8N957 763 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ACOT4Q8N9L9 421 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 FAM110BQ8TC76 370 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 LMX1AQ8TE12 382 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 FIG4Q92562 907 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 CHST8Q9H2A9 424 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 AGPAT4Q9NRZ5 378 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 DCAF13Q9NV06 445 aaKnown RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 EHD3Q9NZN3 535 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 CNOT11Q9UKZ1 510 aaKnown RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 DTNAQ9Y4J8 743 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ASB4Q9Y574 426 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 A0A0G2JN53 185 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 A0A0J9YY10 115 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 LMO7DNF2Z398 122 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 GUCY1B2O75343 617 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 STATHP02808 62 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 FCGR1AP12314 374 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 IL1RNP18510 177 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 FASP25445 335 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 MVDP53602 400 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 PCBP4P57723 403 aaKnown RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 RGS1Q08116 209 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 TGM3Q08188 693 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 SLAMF1Q13291 335 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 RGNQ15493 299 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 GRAMD1BQ3KR37 738 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 WDR45BQ5MNZ6 344 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ZCCHC8Q6NZY4 707 aaKnown RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 TLDC1Q6P9B6 456 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 OGFOD3Q6PK18 319 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 OOSP2Q86WS3 158 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 PTOV1Q86YD1 416 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP3-213ENST00000559711 ZZZ3Q8IYH5 903 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ARL14Q8N4G2 192 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 BAHD1Q8TBE0 780 aaPredicted RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 OR5P2Q8WZ92 322 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 GAL3ST3Q96A11 431 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 FCRL4Q96PJ5 515 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 ABCG4Q9H172 646 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 CD320Q9NPF0 282 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 OLAHQ9NV23 265 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 EVA1BQ9NVM1 165 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 TEX10Q9NXF1 929 aaPredicted RBP12.06□□□□□ -0.48
USP3-213ENST00000559711 PDPK1O15530 556 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 AQP9O43315 295 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 NOBOXO60393 691 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 SMIM10L1P0DMW3 83 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 CSNK1EP49674 416 aaKnown RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 VEZF1Q14119 521 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 MLC1Q15049 377 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 VMACQ2NL98 169 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 FAM98BQ52LJ0 330 aaKnown RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 NDUFAF5Q5TEU4 345 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 CWF19L1Q69YN2 538 aaKnown RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 AMIGO2Q86SJ2 522 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 KCT2Q8NC54 265 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 OR52N2Q8NGI0 321 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 OR8K5Q8NH50 307 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 NETO1Q8TDF5 533 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 PPWD1Q96BP3 646 aaKnown RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 CENPNQ96H22 339 aaPredicted RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 SMIM10Q96HG1 83 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 ZFYVE21Q9BQ24 234 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 CHID1Q9BWS9 393 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 UGT2B28Q9BY64 529 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 SEMA6AQ9H2E6 1030 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 SLAMF7Q9NQ25 335 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 ACSS1Q9NUB1 689 aaPredicted RBP12.05□□□□□ -0.48
USP3-213ENST00000559711 GPATCH2Q9NW75 528 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 POMT2Q9UKY4 750 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 HEATR5BQ9P2D3 2071 aa12.05□□□□□ -0.48
USP3-213ENST00000559711 GON4LQ3T8J9 2241 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 KNL1Q8NG31 2342 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 H0YJX3 145 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 BCAT2O15382 392 aaPredicted RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 SLC35G6P0C7Q6 338 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 RAP2AP10114 183 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 ZNF26P17031 533 aaPredicted RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 HOXB6P17509 224 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms