RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SERPINA6P08185 405 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 DRD2P14416 443 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 IL2P60568 153 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 REEP5Q00765 189 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 TIAL1Q01085 375 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 KCTD19Q17RG1 926 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 SLC25A35Q3KQZ1 300 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 C2CD4AQ8NCU7 369 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 FBXL8Q96CD0 374 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 RMND5BQ96G75 393 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 TSNARE1Q96NA8 513 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 TTYH2Q9BSA4 534 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 TTTY12Q9BZ98 90 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 PELI2Q9HAT8 420 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 DEPPQ9NTK1 212 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 ST6GALNAC2Q9UJ37 374 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 MRPS33Q9Y291 106 aaKnown RBP13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 L3MBTL1Q9Y468 752 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 HRNRQ86YZ3 2850 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 DNHD1Q96M86 4753 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 CLDN4O14493 209 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 OR2J2O76002 312 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 ENO2P09104 434 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 SMIM10L1P0DMW3 83 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 GLI4P10075 376 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 DNASE1P24855 282 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 PEX19P40855 299 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 HSD17B7P56937 341 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 STXBP1P61764 594 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 SLC13A2Q13183 592 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 RBBP5Q15291 538 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 TOR1AIP1Q5JTV8 583 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 ARSKQ6UWY0 536 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 IL20RBQ6UXL0 311 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 SCUBE1Q8IWY4 988 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 ZZZ3Q8IYH5 903 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM109AQ8N4B1 249 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 ANKRD53Q8N9V6 530 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 SMIM10Q96HG1 83 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM173AQ9BQD7 235 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 NPLQ9BXD5 320 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 SPNS1Q9H2V7 528 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 KLHL31Q9H511 634 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 ADAP2Q9NPF8 381 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 PRTFDC1Q9NRG1 225 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 MYOTQ9UBF9 498 aa13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 ZNF223Q9UK11 482 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-210ENST00000551981 A0A088AWK7 358 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 A0A0G2JNJ9 132 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 WDR1O75083 606 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 GLSO94925 669 aaPredicted RBP13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 OR6B1O95007 311 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 GUCA1CO95843 209 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 IGHG3P01860 377 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 ZNF10P21506 573 aaPredicted RBP13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 SAT1P21673 171 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 MAGEA3P43357 314 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 GPR143P51810 404 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 NR0B1P51843 470 aaKnown RBP13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 CDKN2DP55273 166 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 BTN3A2P78410 334 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 BMPR2Q13873 1038 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 CEBPEQ15744 281 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 NXPE4Q6UWF7 544 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 HSDL2Q6YN16 418 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 TMPRSS11BQ86T26 416 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 MMP21Q8N119 569 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 TMEM132CQ8N3T6 1108 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 GAL3ST3Q96A11 431 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 CLEC4MQ9H2X3 399 aaPredicted RBP13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 IL1RL2Q9HB29 575 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 Q9UFV3 132 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 ACAD8Q9UKU7 415 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM215AQ9Y5M1 114 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 KCNE2Q9Y6J6 123 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 CLCA3PQ9Y6N3 262 aa13.17□□□□□ -0.3
CHMP1A-210ENST00000551981 A0A0G2JMM0 328 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 A0A1B0GVC2 190 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 A0A1W2PPB8 328 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 A0A1W2PRS3 328 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 KIR3DP1A8MWS1 328 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 C4orf51C9J302 202 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 AQP7O14520 342 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 PRKNO60260 465 aaPredicted RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 FOSL1P15407 271 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 PGAM1P18669 254 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 CNR1P21554 472 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 PPP2R1BP30154 601 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 SOX3P41225 446 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 MAGEA5P43359 124 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 MAN2A2P49641 1150 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 DLX5P56178 289 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 RAB38P57729 211 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 CRYMQ14894 314 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 ELAVL1Q15717 326 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms