RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CRABP2P29373 138 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 CMPK1P30085 196 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 RPA3P35244 121 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 MSH2P43246 934 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 AP1S2P56377 157 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 TBPL1P62380 186 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 VSNL1P62760 191 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 CDKL1Q00532 357 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 IRF9Q00978 393 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 OR4D1Q15615 310 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 RBBP7Q16576 425 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ERCC6LQ2NKX8 1250 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ATG9BQ674R7 924 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 FRMPD2BQ6IN97 320 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ZNF425Q6IV72 752 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PAMR1Q6UXH9 720 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PAQR7Q86WK9 346 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 TMEM151BQ8IW70 566 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 CENPLQ8N0S6 344 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 OR4N4Q8N0Y3 316 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PLD6Q8N2A8 252 aaKnown RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 GHDCQ8N2G8 530 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 OR56A3Q8NH54 315 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 KIAA1191Q96A73 305 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PYCR2Q96C36 320 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 RHBDF1Q96CC6 855 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 FBXL8Q96CD0 374 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 COX4I2Q96KJ9 171 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ZNF285Q96NJ3 590 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PRAP1Q96NZ9 151 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 GPR78Q96P69 363 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PAFAH2Q99487 392 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PLCD4Q9BRC7 762 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 TRIM54Q9BYV2 358 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 UCK2Q9BZX2 261 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 MRPS30Q9NP92 439 aaKnown RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ENAMQ9NRM1 1142 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ARL15Q9NXU5 204 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 LRFN1Q9P244 771 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 DHCR7Q9UBM7 475 aaKnown RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ZNF180Q9UJW8 692 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 NXT1Q9UKK6 140 aaKnown RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 PLCL2Q9UPR0 1127 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ACOT9Q9Y305 439 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 OARD1Q9Y530 152 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 V9GYY5 206 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 HEATR5BQ9P2D3 2071 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 A0A096LPK6 155 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 OR5H15A6NDH6 313 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZNF839A8K0R7 811 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 FAM227AF5H4B4 570 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZSCAN9O15535 394 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 LCMT2O60294 686 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SRPX2O60687 465 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 BMP10O95393 424 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SHBGP04278 402 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 INHBAP08476 426 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ANXA5P08758 320 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 PRR35P0CG20 571 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 MTHFD2P13995 350 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 TYK2P29597 1187 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SLC26A3P40879 764 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 GDF5P43026 501 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 MAGEA12P43365 314 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ATP6V0D1P61421 351 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ABATP80404 500 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 PMP22Q01453 160 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ALDH6A1Q02252 535 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 KEAP1Q14145 624 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 TGFBIQ15582 683 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 NKG7Q16617 165 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 FBXO48Q5FWF7 155 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZC3H12BQ5HYM0 836 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 WASHC2DQ5SRD0 308 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 LCTLQ6UWM7 567 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 RAPH1Q70E73 1250 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 CDC20BQ86Y33 519 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 PLD3Q8IV08 490 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 CPSF7Q8N684 471 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZNF655Q8N720 491 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 KCTD4Q8WVF5 259 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ISL2Q96A47 359 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ESAMQ96AP7 390 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ALKBH8Q96BT7 664 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 OR2A5Q96R48 311 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ATOH8Q96SQ7 321 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SECISBP2Q96T21 854 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 GPATCH1Q9BRR8 931 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZNF160Q9HCG1 818 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 CCDC177Q9NQR7 707 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SNX15Q9NRS6 342 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SLC22A11Q9NSA0 550 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 TMEM184CQ9NVA4 438 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 SLC22A14Q9Y267 594 aa8.33□□□□□ -1.08
TRAPPC1-202ENST00000540486 EXOC1LA0A1B0GW35 172 aa8.32□□□□□ -1.08
TRAPPC1-202ENST00000540486 FITM1A5D6W6 292 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms