RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 COX4I1P13073 169 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 ALOX12P18054 663 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 HIST1H1TP22492 207 aaPredicted RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 ATP5A1P25705 553 aaKnown RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 ADSLP30566 484 aaPredicted RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 CSTF2P33240 577 aaKnown RBP eCLIP13.42□□□□□ -0.26
CD4-208ENST00000538827 POLR2JP52435 117 aaKnown RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 CLNS1AP54105 237 aaKnown RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 MTTPP55157 894 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 CLDN6P56747 220 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 TAS2R50P59544 299 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 SNRPNP63162 240 aaKnown RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 OLR1P78380 273 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 MXRA7P84157 204 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 ACY1Q03154 408 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 GRM7Q14831 915 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 C16orf72Q14CZ0 275 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 PRTGQ2VWP7 1150 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 GALNT18Q6P9A2 607 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 PRSS41Q7RTY9 318 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 ARHGAP22Q7Z5H3 698 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 PIP4P1Q86T03 277 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 GPR135Q8IZ08 494 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 METTL27Q8N6F8 245 aaPredicted RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 KRTCAP2Q8N6L1 136 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 OR1L3Q8NH93 324 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 EGLN2Q96KS0 407 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 C10orf90Q96M02 699 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 TMEM74Q96NL1 305 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 ANKHQ9HCJ1 492 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 MYNNQ9NPC7 610 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 FGF21Q9NSA1 209 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 SIRT5Q9NXA8 310 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 NDOR1Q9UHB4 597 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 ADAM29Q9UKF5 820 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 FBXW2Q9UKT8 454 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 LOC100653049A0A140TA62 436 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 HYKKA2RU49 373 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 FAM234BA2RU67 622 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 CAPN14A8MX76 684 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 B3GALT2O43825 422 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 KRT34O76011 436 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 KLHL18O94889 574 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 SNRPB2P08579 225 aaKnown RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 COX7A2P14406 83 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 JAK1P23458 1154 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 PRDX6P30041 224 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 ALDH9A1P49189 494 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 MRPL19P49406 292 aaKnown RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 PDX1P52945 283 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 CLDN8P56748 225 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 E2F1Q01094 437 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 C2orf80Q0P641 193 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 SLAMF1Q13291 335 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 ILKQ13418 452 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 TRA2AQ13595 282 aaKnown RBP eCLIP13.41□□□□□ -0.26
CD4-208ENST00000538827 CYLC2Q14093 348 aaPredicted RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 KRT72Q14CN4 511 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 HERC3Q15034 1050 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 TRIP6Q15654 476 aaKnown RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 PGS1Q32NB8 556 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 TIGD2Q4W5G0 525 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 ANKRD26P1Q6NSI1 321 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 ACOT4Q8N9L9 421 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 STARD8Q92502 1023 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 CMTM5Q96DZ9 223 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 C11orf24Q96F05 449 aaPredicted RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 NSL1Q96IY1 281 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 TEX37Q96LM6 180 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 ZNF285Q96NJ3 590 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 OR6C1Q96RD1 312 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 SERINC2Q96SA4 455 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 SLC7A5P2Q9GIP4 190 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 ACTL8Q9H568 366 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 DDX31Q9H8H2 851 aaKnown RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 PRDM7Q9NQW5 492 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 TXLNGQ9NUQ3 528 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 TEX10Q9NXF1 929 aaPredicted RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 AKAP7Q9P0M2 348 aaPredicted RBP13.41□□□□□ -0.26
CD4-208ENST00000538827 PDP2Q9P2J9 529 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 NAALAD2Q9Y3Q0 740 aa13.41□□□□□ -0.26
CD4-208ENST00000538827 FREM2Q5SZK8 3169 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 A0A0A6YYC8 382 aaPredicted RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 SPAARA0A1B0GVQ0 90 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 I3L1I5 382 aaPredicted RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 SGK494L7N484 410 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 ANKRD28O15084 1053 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 SCAMP2O15127 329 aaKnown RBP13.4□□□□□ -0.26
CD4-208ENST00000538827 RDH16O75452 317 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 MED26O95402 600 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 FAM58BPP0C7Q3 252 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 CD1EP15812 388 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 IL12AP29459 219 aa13.4□□□□□ -0.26
CD4-208ENST00000538827 TSFMP43897 325 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms