RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 RAB26Q9ULW5 256 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 COLEC10Q9Y6Z7 277 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 ZDBF2Q9HCK1 2354 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 PGRMC2O15173 223 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CAPN5O15484 640 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 GPR37L1O60883 481 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 B4GALT2O60909 372 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 SCELO95171 688 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 APBB3O95704 486 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CXCR2P25025 360 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 YAP1P46937 504 aaKnown RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 LSSP48449 732 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CHN2P52757 468 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 VLDLRP98155 873 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 C18orf63Q68DL7 685 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 KIAA0895LQ68EN5 471 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 TNFAIP8L2Q6P589 184 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CHERPQ8IWX8 916 aaKnown RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 MARVELD2Q8N4S9 558 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 DENND6BQ8NEG7 585 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 ZCCHC10Q8TBK6 192 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 PCBD2Q9H0N5 130 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 MIR1-1HGQ9H1L0 117 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 BTNL2Q9UIR0 455 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 SEC16AO15027 2179 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 GNGT2O14610 69 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 HCRTR1O43613 425 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CTSVO60911 334 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 ERAL1O75616 437 aaKnown RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 FKBP9O95302 570 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 LINGO3P0C6S8 592 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 KDELR2P33947 212 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CDK9P50750 372 aaKnown RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 C21orf58P58505 322 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 DUSP2Q05923 314 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 FZD2Q14332 565 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 OR4C11Q6IEV9 310 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 FKBP9P1Q75LS8 142 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 CAMKMTQ7Z624 323 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 TAF8Q7Z7C8 310 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 SERPINA11Q86U17 422 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 TRIM48Q8IWZ4 208 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 SIX5Q8N196 739 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 METTL2AQ96IZ6 378 aaKnown RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 FAF1Q9UNN5 650 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-205ENST00000538545 ATG4BQ9Y4P1 393 aa13.44□□□□□ -0.26
ACTN1-205ENST00000538545 A6NHS1 94 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 CTSBP07858 339 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 CHI3L1P36222 383 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-205ENST00000538545 OR1E2P47887 323 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ILF3Q12906 894 aaKnown RBP eCLIP13.43□□□□□ -0.26
ACTN1-205ENST00000538545 TOR1AIP1Q5JTV8 583 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ZC3H7AQ8IWR0 971 aaKnown RBP13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ZNF687Q8N1G0 1237 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 SLC37A2Q8TED4 501 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 RAB8BQ92930 207 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 RGMAQ96B86 450 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 MS4A6EQ96DS6 147 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ORAI3Q9BRQ5 295 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 CHST8Q9H2A9 424 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 TAS2R9Q9NYW1 312 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 IGHV1OR15-9A0A0B4J2B8 117 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ZNF860A6NHJ4 632 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 PRAMEF26H0Y7S4 382 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 WNT1P04628 370 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 DDCP20711 480 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 CD6P30203 668 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 POLR2IP36954 125 aaKnown RBP13.43□□□□□ -0.26
ACTN1-205ENST00000538545 MANFP55145 182 aaKnown RBP13.43□□□□□ -0.26
ACTN1-205ENST00000538545 OLR1P78380 273 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 SLAMF1Q13291 335 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 TJAP1Q5JTD0 557 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 NDUFAF5Q5TEU4 345 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ANXA8L1Q5VT79 327 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 SYT13Q7L8C5 426 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ABI3BPQ7Z7G0 1075 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 NUDT13Q86X67 352 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 SYNPOQ8N3V7 929 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 SMYD1Q8NB12 490 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 NFKBIDQ8NI38 313 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ASB12Q8WXK4 309 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 PYURFQ96I23 114 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 ADI1Q9BV57 179 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 UGT2B28Q9BY64 529 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 STARD5Q9NSY2 213 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 FBXL21Q9UKT6 434 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 UNC13CQ8NB66 2214 aa13.43□□□□□ -0.26
ACTN1-205ENST00000538545 LOC105369274A0A096LPK9 316 aa13.42□□□□□ -0.26
ACTN1-205ENST00000538545 LOC102723532A0A0G2JNH3 316 aa13.42□□□□□ -0.26
ACTN1-205ENST00000538545 B4DGG1 531 aa13.42□□□□□ -0.26
ACTN1-205ENST00000538545 P2RX6O15547 441 aa13.42□□□□□ -0.26
ACTN1-205ENST00000538545 EIF2S1P05198 315 aaKnown RBP13.42□□□□□ -0.26
ACTN1-205ENST00000538545 GRK3P35626 688 aa13.42□□□□□ -0.26
ACTN1-205ENST00000538545 CDH15P55291 814 aa13.42□□□□□ -0.26
ACTN1-205ENST00000538545 RPS26P11Q5JNZ5 115 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-205ENST00000538545 FRMPD2BQ6IN97 320 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms